RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 POTECB2RU33 542 aa9.03□□□□□ -0.96
LMBR1-204ENST00000415428 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
LMBR1-204ENST00000415428 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
LMBR1-204ENST00000415428 NUTM2FA1L443 756 aa9.02□□□□□ -0.97
LMBR1-204ENST00000415428 CCNL1Q9UK58 526 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-204ENST00000415428 KLRG2A4D1S0 409 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-204ENST00000415428 ERVV-2B6SEH9 535 aa9.01□□□□□ -0.97
LMBR1-204ENST00000415428 KAT6BQ8WYB5 2073 aa9□□□□□ -0.97
LMBR1-204ENST00000415428 NLGN1Q8N2Q7 840 aa9□□□□□ -0.97
LMBR1-204ENST00000415428 WBP1LQ9NX94 342 aa9□□□□□ -0.97
LMBR1-204ENST00000415428 COL4A1P02462 1669 aa9□□□□□ -0.97
LMBR1-204ENST00000415428 PAK3O75914 559 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-204ENST00000415428 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
LMBR1-204ENST00000415428 GLTPD2A6NH11 291 aa8.99□□□□□ -0.97
LMBR1-204ENST00000415428 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
LMBR1-204ENST00000415428 LINC00116Q8NCU8 138 aa8.99□□□□□ -0.97
LMBR1-204ENST00000415428 DCAF11Q8TEB1 546 aa8.99□□□□□ -0.97
LMBR1-204ENST00000415428 CACNA1SQ13698 1873 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 A0A0G2JS52 829 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 MYT1Q01538 1121 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 WASHC2AQ641Q2 1341 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 TESK2Q96S53 571 aa8.98□□□□□ -0.97
LMBR1-204ENST00000415428 HIRIP3Q9BW71 556 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-204ENST00000415428 TFCP2L1Q9NZI6 479 aa8.97□□□□□ -0.97
LMBR1-204ENST00000415428 USP42Q9H9J4 1324 aaKnown RBP8.97□□□□□ -0.97
LMBR1-204ENST00000415428 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
LMBR1-204ENST00000415428 VPS33BQ9H267 617 aa8.97□□□□□ -0.97
LMBR1-204ENST00000415428 CCDC87Q9NVE4 849 aa8.97□□□□□ -0.97
LMBR1-204ENST00000415428 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
LMBR1-204ENST00000415428 HSPA1AP0DMV8 641 aaKnown RBP8.96□□□□□ -0.97
LMBR1-204ENST00000415428 HSPA1BP0DMV9 641 aaKnown RBP8.96□□□□□ -0.97
LMBR1-204ENST00000415428 CTCFP49711 727 aaPredicted RBP8.96□□□□□ -0.97
LMBR1-204ENST00000415428 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.98
LMBR1-204ENST00000415428 SLX4Q8IY92 1834 aa8.96□□□□□ -0.98
LMBR1-204ENST00000415428 GYS1P13807 737 aa8.96□□□□□ -0.98
LMBR1-204ENST00000415428 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
LMBR1-204ENST00000415428 CABP2Q9NPB3 220 aa8.96□□□□□ -0.98
LMBR1-204ENST00000415428 COL3A1P02461 1466 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-204ENST00000415428 NBPF1Q3BBV0 1214 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 CYP27B1O15528 508 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 HSPA8P11142 646 aaKnown RBP8.95□□□□□ -0.98
LMBR1-204ENST00000415428 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
LMBR1-204ENST00000415428 CFHR5Q9BXR6 569 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 SAGE1Q9NXZ1 904 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
LMBR1-204ENST00000415428 CA12O43570 354 aa8.94□□□□□ -0.98
LMBR1-204ENST00000415428 POLRMTO00411 1230 aaKnown RBP8.94□□□□□ -0.98
LMBR1-204ENST00000415428 SOS1Q07889 1333 aaPredicted RBP8.94□□□□□ -0.98
LMBR1-204ENST00000415428 CDHR2Q9BYE9 1310 aa8.94□□□□□ -0.98
LMBR1-204ENST00000415428 ITPK1Q13572 414 aa8.93□□□□□ -0.98
LMBR1-204ENST00000415428 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
LMBR1-204ENST00000415428 LMNB1P20700 586 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
LMBR1-204ENST00000415428 PIGBQ92521 554 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 LOC102724428A0A0B4J2F2 783 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 SIK1P57059 783 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 PIM2Q9P1W9 311 aa8.92□□□□□ -0.98
LMBR1-204ENST00000415428 SOGA3Q5TF21 947 aa8.91□□□□□ -0.98
LMBR1-204ENST00000415428 STYK1Q6J9G0 422 aa8.91□□□□□ -0.98
LMBR1-204ENST00000415428 CEMIPQ8WUJ3 1361 aa8.91□□□□□ -0.98
LMBR1-204ENST00000415428 CHADLQ6NUI6 762 aa8.91□□□□□ -0.98
LMBR1-204ENST00000415428 LDHDQ86WU2 507 aa8.91□□□□□ -0.98
LMBR1-204ENST00000415428 VEGFAP15692 232 aaPredicted RBP8.9□□□□□ -0.98
LMBR1-204ENST00000415428 PHKG2P15735 406 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 SLC4A9Q96Q91 983 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 NMRK2Q9NPI5 230 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 HSP90AB1P08238 724 aaKnown RBP8.9□□□□□ -0.98
LMBR1-204ENST00000415428 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 C9orf131Q5VYM1 1079 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 HDGFL2Q7Z4V5 671 aaPredicted RBP8.9□□□□□ -0.98
LMBR1-204ENST00000415428 NBPF4Q96M43 638 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
LMBR1-204ENST00000415428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.99
LMBR1-204ENST00000415428 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.99
LMBR1-204ENST00000415428 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
LMBR1-204ENST00000415428 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
LMBR1-204ENST00000415428 NPC1L1Q9UHC9 1359 aa8.89□□□□□ -0.99
LMBR1-204ENST00000415428 KIF7Q2M1P5 1343 aa8.89□□□□□ -0.99
LMBR1-204ENST00000415428 DPEP1P16444 411 aa8.89□□□□□ -0.99
LMBR1-204ENST00000415428 TMF1P82094 1093 aa8.89□□□□□ -0.99
LMBR1-204ENST00000415428 NME9Q86XW9 330 aa8.89□□□□□ -0.99
LMBR1-204ENST00000415428 USP35Q9P2H5 1018 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 NUP98P52948 1817 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 TAF1P21675 1872 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
LMBR1-204ENST00000415428 MAP2K2P36507 400 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 DALRD3Q5D0E6 543 aaKnown RBP8.88□□□□□ -0.99
LMBR1-204ENST00000415428 NECTIN2Q92692 538 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 ACSBG1Q96GR2 724 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 AK7Q96M32 723 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 COL4A5P29400 1685 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 FOXN1O15353 648 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 CAPN2P17655 700 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 DDR1Q08345 913 aa8.88□□□□□ -0.99
LMBR1-204ENST00000415428 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms