RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 BCL9O00512 1426 aa13.18□□□□□ -0.3
LINC01090-201ENST00000415357 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
LINC01090-201ENST00000415357 SHANK3Q9BYB0 1731 aa13.18□□□□□ -0.3
LINC01090-201ENST00000415357 NHSQ6T4R5 1651 aa13.18□□□□□ -0.3
LINC01090-201ENST00000415357 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
LINC01090-201ENST00000415357 KCNQ2O43526 872 aa13.17□□□□□ -0.3
LINC01090-201ENST00000415357 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
LINC01090-201ENST00000415357 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
LINC01090-201ENST00000415357 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
LINC01090-201ENST00000415357 NSD2O96028 1365 aa13.17□□□□□ -0.3
LINC01090-201ENST00000415357 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
LINC01090-201ENST00000415357 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
LINC01090-201ENST00000415357 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
LINC01090-201ENST00000415357 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
LINC01090-201ENST00000415357 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
LINC01090-201ENST00000415357 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
LINC01090-201ENST00000415357 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
LINC01090-201ENST00000415357 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
LINC01090-201ENST00000415357 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
LINC01090-201ENST00000415357 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
LINC01090-201ENST00000415357 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
LINC01090-201ENST00000415357 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
LINC01090-201ENST00000415357 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
LINC01090-201ENST00000415357 BTAF1O14981 1849 aa13.12□□□□□ -0.31
LINC01090-201ENST00000415357 PLSCR1O15162 318 aa13.12□□□□□ -0.31
LINC01090-201ENST00000415357 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
LINC01090-201ENST00000415357 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
LINC01090-201ENST00000415357 EYA1Q99502 592 aa13.12□□□□□ -0.31
LINC01090-201ENST00000415357 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
LINC01090-201ENST00000415357 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
LINC01090-201ENST00000415357 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
LINC01090-201ENST00000415357 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
LINC01090-201ENST00000415357 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
LINC01090-201ENST00000415357 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
LINC01090-201ENST00000415357 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
LINC01090-201ENST00000415357 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
LINC01090-201ENST00000415357 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
LINC01090-201ENST00000415357 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
LINC01090-201ENST00000415357 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
LINC01090-201ENST00000415357 NBPF14Q5TI25 921 aa13.08□□□□□ -0.32
LINC01090-201ENST00000415357 PCDH11XQ9BZA7 1347 aa13.08□□□□□ -0.32
LINC01090-201ENST00000415357 PCDH11YQ9BZA8 1340 aa13.08□□□□□ -0.32
LINC01090-201ENST00000415357 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
LINC01090-201ENST00000415357 LRP5O75197 1615 aa13.07□□□□□ -0.32
LINC01090-201ENST00000415357 CYP27B1O15528 508 aa13.07□□□□□ -0.32
LINC01090-201ENST00000415357 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
LINC01090-201ENST00000415357 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
LINC01090-201ENST00000415357 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
LINC01090-201ENST00000415357 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
LINC01090-201ENST00000415357 MTHFSP49914 203 aa13.04□□□□□ -0.32
LINC01090-201ENST00000415357 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
LINC01090-201ENST00000415357 KCNQ4P56696 695 aa13.03□□□□□ -0.32
LINC01090-201ENST00000415357 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
LINC01090-201ENST00000415357 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
LINC01090-201ENST00000415357 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
LINC01090-201ENST00000415357 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
LINC01090-201ENST00000415357 CASZ1Q86V15 1759 aa13.02□□□□□ -0.32
LINC01090-201ENST00000415357 IL13P35225 146 aa13.02□□□□□ -0.33
LINC01090-201ENST00000415357 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
LINC01090-201ENST00000415357 LY75O60449 1722 aa13.02□□□□□ -0.33
LINC01090-201ENST00000415357 PHKG2P15735 406 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 ITGB4P16144 1822 aa13.01□□□□□ -0.33
LINC01090-201ENST00000415357 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
LINC01090-201ENST00000415357 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
LINC01090-201ENST00000415357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01090-201ENST00000415357 KDRP35968 1356 aa12.99□□□□□ -0.33
LINC01090-201ENST00000415357 IER5LQ5T953 404 aa12.99□□□□□ -0.33
LINC01090-201ENST00000415357 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
LINC01090-201ENST00000415357 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
LINC01090-201ENST00000415357 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
LINC01090-201ENST00000415357 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
LINC01090-201ENST00000415357 HMOX1P09601 288 aa12.98□□□□□ -0.33
LINC01090-201ENST00000415357 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
LINC01090-201ENST00000415357 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
LINC01090-201ENST00000415357 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
LINC01090-201ENST00000415357 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
LINC01090-201ENST00000415357 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
LINC01090-201ENST00000415357 SEC24BO95487 1268 aa12.97□□□□□ -0.33
LINC01090-201ENST00000415357 C7P10643 843 aa12.97□□□□□ -0.33
LINC01090-201ENST00000415357 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
LINC01090-201ENST00000415357 PIGBQ92521 554 aa12.97□□□□□ -0.33
LINC01090-201ENST00000415357 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
LINC01090-201ENST00000415357 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
LINC01090-201ENST00000415357 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
LINC01090-201ENST00000415357 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
LINC01090-201ENST00000415357 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
LINC01090-201ENST00000415357 PLCG2P16885 1265 aa12.95□□□□□ -0.34
LINC01090-201ENST00000415357 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
LINC01090-201ENST00000415357 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
LINC01090-201ENST00000415357 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
LINC01090-201ENST00000415357 C5P01031 1676 aa12.95□□□□□ -0.34
LINC01090-201ENST00000415357 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
LINC01090-201ENST00000415357 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
LINC01090-201ENST00000415357 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
LINC01090-201ENST00000415357 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms