RNA–Protein interactions for RNA: ENST00000415276.2

HCG27-203, Transcript of HLA complex group 27, humanhuman

TSL 3

Gene HCG27, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-203ENST00000415276 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
HCG27-203ENST00000415276 ITGB4P16144 1822 aa17.69■□□□□ 0.42
HCG27-203ENST00000415276 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
HCG27-203ENST00000415276 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
HCG27-203ENST00000415276 PHF14O94880 888 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 SBF1O95248 1867 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 HOXC9P31274 260 aa17.68■□□□□ 0.42
HCG27-203ENST00000415276 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
HCG27-203ENST00000415276 SSFA2P28290 1259 aa17.67■□□□□ 0.42
HCG27-203ENST00000415276 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
HCG27-203ENST00000415276 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
HCG27-203ENST00000415276 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
HCG27-203ENST00000415276 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
HCG27-203ENST00000415276 RRAGCQ9HB90 399 aa17.66■□□□□ 0.42
HCG27-203ENST00000415276 MEGF6O75095 1541 aa17.65■□□□□ 0.42
HCG27-203ENST00000415276 FCHSD2O94868 740 aa17.64■□□□□ 0.41
HCG27-203ENST00000415276 FLT4P35916 1363 aa17.64■□□□□ 0.41
HCG27-203ENST00000415276 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
HCG27-203ENST00000415276 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
HCG27-203ENST00000415276 SMARCC1Q92922 1105 aaPredicted RBP17.63■□□□□ 0.41
HCG27-203ENST00000415276 MAP2P11137 1827 aaKnown RBP17.63■□□□□ 0.41
HCG27-203ENST00000415276 MMP10P09238 476 aa17.62■□□□□ 0.41
HCG27-203ENST00000415276 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
HCG27-203ENST00000415276 MORC1Q86VD1 984 aa17.62■□□□□ 0.41
HCG27-203ENST00000415276 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
HCG27-203ENST00000415276 INSRP06213 1382 aa17.62■□□□□ 0.41
HCG27-203ENST00000415276 SMG6Q86US8 1419 aaKnown RBP17.62■□□□□ 0.41
HCG27-203ENST00000415276 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
HCG27-203ENST00000415276 MPRIPQ6WCQ1 1025 aa17.61■□□□□ 0.41
HCG27-203ENST00000415276 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
HCG27-203ENST00000415276 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
HCG27-203ENST00000415276 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
HCG27-203ENST00000415276 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
HCG27-203ENST00000415276 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
HCG27-203ENST00000415276 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
HCG27-203ENST00000415276 DPEP1P16444 411 aa17.58■□□□□ 0.4
HCG27-203ENST00000415276 C4AP0C0L4 1744 aa17.58■□□□□ 0.4
HCG27-203ENST00000415276 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
HCG27-203ENST00000415276 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
HCG27-203ENST00000415276 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
HCG27-203ENST00000415276 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
HCG27-203ENST00000415276 NLGN1Q8N2Q7 840 aa17.56■□□□□ 0.4
HCG27-203ENST00000415276 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
HCG27-203ENST00000415276 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
HCG27-203ENST00000415276 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
HCG27-203ENST00000415276 GNPATO15228 680 aa17.55■□□□□ 0.4
HCG27-203ENST00000415276 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
HCG27-203ENST00000415276 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
HCG27-203ENST00000415276 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
HCG27-203ENST00000415276 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
HCG27-203ENST00000415276 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
HCG27-203ENST00000415276 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
HCG27-203ENST00000415276 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
HCG27-203ENST00000415276 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
HCG27-203ENST00000415276 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
HCG27-203ENST00000415276 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
HCG27-203ENST00000415276 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
HCG27-203ENST00000415276 KCNA3P22001 575 aa17.53■□□□□ 0.4
HCG27-203ENST00000415276 SIK1P57059 783 aa17.53■□□□□ 0.4
HCG27-203ENST00000415276 DALRD3Q5D0E6 543 aaKnown RBP17.52■□□□□ 0.4
HCG27-203ENST00000415276 FOXN1O15353 648 aa17.5■□□□□ 0.39
HCG27-203ENST00000415276 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
HCG27-203ENST00000415276 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
HCG27-203ENST00000415276 PIGBQ92521 554 aa17.5■□□□□ 0.39
HCG27-203ENST00000415276 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
HCG27-203ENST00000415276 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
HCG27-203ENST00000415276 EIF4A2Q14240 407 aaKnown RBP17.49■□□□□ 0.39
HCG27-203ENST00000415276 TIAM2Q8IVF5 1701 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 GLTPD2A6NH11 291 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 CYP27B1O15528 508 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 ATP6V1AP38606 617 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 EYA1Q99502 592 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 CREBZFQ9NS37 354 aa17.48■□□□□ 0.39
HCG27-203ENST00000415276 RTCBQ9Y3I0 505 aaKnown RBP17.48■□□□□ 0.39
HCG27-203ENST00000415276 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
HCG27-203ENST00000415276 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
HCG27-203ENST00000415276 MTHFSP49914 203 aa17.47■□□□□ 0.39
HCG27-203ENST00000415276 ITPK1Q13572 414 aa17.47■□□□□ 0.39
HCG27-203ENST00000415276 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
HCG27-203ENST00000415276 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
HCG27-203ENST00000415276 ZNF831Q5JPB2 1677 aa17.45■□□□□ 0.38
HCG27-203ENST00000415276 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
HCG27-203ENST00000415276 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
HCG27-203ENST00000415276 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
HCG27-203ENST00000415276 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
HCG27-203ENST00000415276 GYS1P13807 737 aa17.44■□□□□ 0.38
HCG27-203ENST00000415276 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
HCG27-203ENST00000415276 ABHD8Q96I13 439 aa17.44■□□□□ 0.38
HCG27-203ENST00000415276 LMNB1P20700 586 aa17.43■□□□□ 0.38
HCG27-203ENST00000415276 RFC4P35249 363 aa17.43■□□□□ 0.38
HCG27-203ENST00000415276 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
HCG27-203ENST00000415276 ARHGEF1Q92888 912 aaKnown RBP17.43■□□□□ 0.38
HCG27-203ENST00000415276 IL13P35225 146 aa17.42■□□□□ 0.38
HCG27-203ENST00000415276 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
HCG27-203ENST00000415276 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
HCG27-203ENST00000415276 DICER1Q9UPY3 1922 aaKnown RBP17.42■□□□□ 0.38
HCG27-203ENST00000415276 CNTNAP1P78357 1384 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms