RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 MAP2P11137 1827 aaKnown RBP29.66■■■□□ 2.34
RHBDD3-204ENST00000414672 ANKRD26Q9UPS8 1709 aa29.66■■■□□ 2.34
RHBDD3-204ENST00000414672 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
RHBDD3-204ENST00000414672 ADCY9O60503 1353 aa29.65■■■□□ 2.34
RHBDD3-204ENST00000414672 TRAPPC3LQ5T215 181 aa29.65■■■□□ 2.34
RHBDD3-204ENST00000414672 RTCBQ9Y3I0 505 aaKnown RBP29.65■■■□□ 2.34
RHBDD3-204ENST00000414672 CEP350Q5VT06 3117 aa29.63■■■□□ 2.33
RHBDD3-204ENST00000414672 ERVV-2B6SEH9 535 aa29.62■■■□□ 2.33
RHBDD3-204ENST00000414672 HSP90AB1P08238 724 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-204ENST00000414672 PLEKHO1Q53GL0 409 aaPredicted RBP29.61■■■□□ 2.33
RHBDD3-204ENST00000414672 NLGN1Q8N2Q7 840 aa29.61■■■□□ 2.33
RHBDD3-204ENST00000414672 DCAF5Q96JK2 942 aa29.61■■■□□ 2.33
RHBDD3-204ENST00000414672 HSPA6P17066 643 aa29.58■■■□□ 2.33
RHBDD3-204ENST00000414672 CABP4P57796 275 aa29.58■■■□□ 2.33
RHBDD3-204ENST00000414672 ZNF530Q6P9A1 599 aaPredicted RBP29.58■■■□□ 2.33
RHBDD3-204ENST00000414672 SLC4A9Q96Q91 983 aa29.58■■■□□ 2.33
RHBDD3-204ENST00000414672 RFC4P35249 363 aa29.57■■■□□ 2.32
RHBDD3-204ENST00000414672 ARHGEF1Q92888 912 aaKnown RBP29.57■■■□□ 2.32
RHBDD3-204ENST00000414672 BCS1LQ9Y276 419 aa29.57■■■□□ 2.32
RHBDD3-204ENST00000414672 KDRP35968 1356 aa29.56■■■□□ 2.32
RHBDD3-204ENST00000414672 A0A0G2JLW4 131 aa29.56■■■□□ 2.32
RHBDD3-204ENST00000414672 TGFB2P61812 414 aa29.56■■■□□ 2.32
RHBDD3-204ENST00000414672 PLEKHG2Q9H7P9 1386 aa29.55■■■□□ 2.32
RHBDD3-204ENST00000414672 ADRA2BP18089 450 aa29.55■■■□□ 2.32
RHBDD3-204ENST00000414672 RC3H1Q5TC82 1133 aaKnown RBP29.55■■■□□ 2.32
RHBDD3-204ENST00000414672 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
RHBDD3-204ENST00000414672 PANK3Q9H999 370 aa29.55■■■□□ 2.32
RHBDD3-204ENST00000414672 AMOTQ4VCS5 1084 aa29.54■■■□□ 2.32
RHBDD3-204ENST00000414672 CCDC87Q9NVE4 849 aa29.54■■■□□ 2.32
RHBDD3-204ENST00000414672 MTHFSP49914 203 aa29.53■■■□□ 2.32
RHBDD3-204ENST00000414672 PARP3Q9Y6F1 533 aa29.53■■■□□ 2.32
RHBDD3-204ENST00000414672 PXDNLA1KZ92 1463 aa29.53■■■□□ 2.32
RHBDD3-204ENST00000414672 PTCD1O75127 700 aaKnown RBP29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 RPS6KA4O75676 772 aa29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 C1orf141Q5JVX7 400 aa29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 IFFO2Q5TF58 517 aa29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 ARHGAP27Q6ZUM4 889 aa29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 CICQ96RK0 1608 aaPredicted RBP29.52■■■□□ 2.32
RHBDD3-204ENST00000414672 CNTNAP4Q9C0A0 1308 aa29.51■■■□□ 2.32
RHBDD3-204ENST00000414672 GYS1P13807 737 aa29.51■■■□□ 2.31
RHBDD3-204ENST00000414672 MORC1Q86VD1 984 aa29.51■■■□□ 2.31
RHBDD3-204ENST00000414672 KIF3CO14782 793 aa29.5■■■□□ 2.31
RHBDD3-204ENST00000414672 EIF4G2P78344 907 aaKnown RBP eCLIP29.5■■■□□ 2.31
RHBDD3-204ENST00000414672 DPEP1P16444 411 aa29.49■■■□□ 2.31
RHBDD3-204ENST00000414672 FCHSD2O94868 740 aa29.48■■■□□ 2.31
RHBDD3-204ENST00000414672 HSPA5P11021 654 aaKnown RBP29.48■■■□□ 2.31
RHBDD3-204ENST00000414672 AEBP1Q8IUX7 1158 aa29.48■■■□□ 2.31
RHBDD3-204ENST00000414672 KDM6AO15550 1401 aaPredicted RBP29.47■■■□□ 2.31
RHBDD3-204ENST00000414672 C10orf71Q711Q0 1435 aa29.47■■■□□ 2.31
RHBDD3-204ENST00000414672 NFATC2IPQ8NCF5 419 aa29.47■■■□□ 2.31
RHBDD3-204ENST00000414672 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.31
RHBDD3-204ENST00000414672 SULT6B1Q6IMI4 303 aa29.45■■■□□ 2.31
RHBDD3-204ENST00000414672 CRKLP46109 303 aaKnown RBP29.44■■■□□ 2.3
RHBDD3-204ENST00000414672 N4BP2Q86UW6 1770 aaPredicted RBP29.44■■■□□ 2.3
RHBDD3-204ENST00000414672 SRP68Q9UHB9 627 aaKnown RBP29.42■■■□□ 2.3
RHBDD3-204ENST00000414672 ZNF831Q5JPB2 1677 aa29.41■■■□□ 2.3
RHBDD3-204ENST00000414672 KIF13BQ9NQT8 1826 aa29.41■■■□□ 2.3
RHBDD3-204ENST00000414672 C4AP0C0L4 1744 aa29.4■■■□□ 2.3
RHBDD3-204ENST00000414672 KNSTRNQ9Y448 316 aa29.4■■■□□ 2.3
RHBDD3-204ENST00000414672 PIM2Q9P1W9 311 aa29.39■■■□□ 2.3
RHBDD3-204ENST00000414672 COL5A3P25940 1745 aaPredicted RBP29.39■■■□□ 2.3
RHBDD3-204ENST00000414672 KIAA1551Q9HCM1 1747 aa29.38■■■□□ 2.29
RHBDD3-204ENST00000414672 TOMM70O94826 608 aa29.38■■■□□ 2.29
RHBDD3-204ENST00000414672 FKBP8Q14318 412 aa29.38■■■□□ 2.29
RHBDD3-204ENST00000414672 APLP1P51693 650 aa29.37■■■□□ 2.29
RHBDD3-204ENST00000414672 KCNA3P22001 575 aa29.36■■■□□ 2.29
RHBDD3-204ENST00000414672 C9orf131Q5VYM1 1079 aa29.36■■■□□ 2.29
RHBDD3-204ENST00000414672 NMRK2Q9NPI5 230 aa29.36■■■□□ 2.29
RHBDD3-204ENST00000414672 USP42Q9H9J4 1324 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-204ENST00000414672 IL13P35225 146 aa29.35■■■□□ 2.29
RHBDD3-204ENST00000414672 DALRD3Q5D0E6 543 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-204ENST00000414672 MYH14Q7Z406 1995 aaKnown RBP29.34■■■□□ 2.29
RHBDD3-204ENST00000414672 DDR1Q08345 913 aa29.34■■■□□ 2.29
RHBDD3-204ENST00000414672 ZPR1O75312 459 aa29.33■■■□□ 2.29
RHBDD3-204ENST00000414672 INTS5Q6P9B9 1019 aaKnown RBP29.33■■■□□ 2.29
RHBDD3-204ENST00000414672 AKAP4Q5JQC9 854 aa29.32■■■□□ 2.28
RHBDD3-204ENST00000414672 C16orf71Q8IYS4 520 aaPredicted RBP29.32■■■□□ 2.28
RHBDD3-204ENST00000414672 DNAJC10Q8IXB1 793 aa29.31■■■□□ 2.28
RHBDD3-204ENST00000414672 CHRNA5P30532 468 aa29.3■■■□□ 2.28
RHBDD3-204ENST00000414672 SLC52A2Q9HAB3 445 aa29.3■■■□□ 2.28
RHBDD3-204ENST00000414672 USPL1Q5W0Q7 1092 aa29.29■■■□□ 2.28
RHBDD3-204ENST00000414672 LGR6Q9HBX8 967 aa29.29■■■□□ 2.28
RHBDD3-204ENST00000414672 RNF181Q9P0P0 153 aa29.28■■■□□ 2.28
RHBDD3-204ENST00000414672 POLRMTO00411 1230 aaKnown RBP29.27■■■□□ 2.28
RHBDD3-204ENST00000414672 HMOX1P09601 288 aa29.26■■■□□ 2.27
RHBDD3-204ENST00000414672 TM4SF1P30408 202 aa29.26■■■□□ 2.27
RHBDD3-204ENST00000414672 SLC39A6Q13433 755 aa29.26■■■□□ 2.27
RHBDD3-204ENST00000414672 KDM2BQ8NHM5 1336 aa29.25■■■□□ 2.27
RHBDD3-204ENST00000414672 RBM46Q8TBY0 533 aaKnown RBP29.25■■■□□ 2.27
RHBDD3-204ENST00000414672 RNMTO43148 476 aaKnown RBP29.24■■■□□ 2.27
RHBDD3-204ENST00000414672 TJP1Q07157 1748 aa29.24■■■□□ 2.27
RHBDD3-204ENST00000414672 CYP19A1P11511 503 aaPredicted RBP29.23■■■□□ 2.27
RHBDD3-204ENST00000414672 BRCA1P38398 1863 aaKnown RBP29.23■■■□□ 2.27
RHBDD3-204ENST00000414672 SOS1Q07889 1333 aaPredicted RBP29.22■■■□□ 2.27
RHBDD3-204ENST00000414672 AMER1Q5JTC6 1135 aaPredicted RBP29.22■■■□□ 2.27
RHBDD3-204ENST00000414672 DNAJC5GQ8N7S2 189 aa29.22■■■□□ 2.27
RHBDD3-204ENST00000414672 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
RHBDD3-204ENST00000414672 ARFGEF1Q9Y6D6 1849 aa29.2■■■□□ 2.27
RHBDD3-204ENST00000414672 RRAGCQ9HB90 399 aa29.2■■■□□ 2.26
RHBDD3-204ENST00000414672 NARFQ9UHQ1 456 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms