RNA–Protein interactions for RNA: ENST00000413805.2

HMGN1P37-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 37, humanhuman

BASIC

Gene HMGN1P37, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P37-201ENST00000413805 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
HMGN1P37-201ENST00000413805 LOC102724428A0A0B4J2F2 783 aa15.26■□□□□ 0.03
HMGN1P37-201ENST00000413805 HMOX1P09601 288 aa15.26■□□□□ 0.03
HMGN1P37-201ENST00000413805 SIK1P57059 783 aa15.26■□□□□ 0.03
HMGN1P37-201ENST00000413805 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
HMGN1P37-201ENST00000413805 TAF1LQ8IZX4 1826 aa15.26■□□□□ 0.03
HMGN1P37-201ENST00000413805 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 IL13P35225 146 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 GPR162Q16538 588 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 FLAD1Q8NFF5 587 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 C4BP0C0L5 1744 aa15.25■□□□□ 0.03
HMGN1P37-201ENST00000413805 ERVV-2B6SEH9 535 aa15.24■□□□□ 0.03
HMGN1P37-201ENST00000413805 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
HMGN1P37-201ENST00000413805 GNPATO15228 680 aa15.23■□□□□ 0.03
HMGN1P37-201ENST00000413805 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
HMGN1P37-201ENST00000413805 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
HMGN1P37-201ENST00000413805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
HMGN1P37-201ENST00000413805 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
HMGN1P37-201ENST00000413805 ITPK1Q13572 414 aa15.22■□□□□ 0.03
HMGN1P37-201ENST00000413805 PTCD1O75127 700 aaKnown RBP15.21■□□□□ 0.03
HMGN1P37-201ENST00000413805 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
HMGN1P37-201ENST00000413805 AMIGO3Q86WK7 504 aa15.2■□□□□ 0.02
HMGN1P37-201ENST00000413805 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
HMGN1P37-201ENST00000413805 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
HMGN1P37-201ENST00000413805 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
HMGN1P37-201ENST00000413805 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
HMGN1P37-201ENST00000413805 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
HMGN1P37-201ENST00000413805 KDRP35968 1356 aa15.17■□□□□ 0.02
HMGN1P37-201ENST00000413805 SSFA2P28290 1259 aa15.17■□□□□ 0.02
HMGN1P37-201ENST00000413805 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
HMGN1P37-201ENST00000413805 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
HMGN1P37-201ENST00000413805 MAP3K5Q99683 1374 aa15.16■□□□□ 0.02
HMGN1P37-201ENST00000413805 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
HMGN1P37-201ENST00000413805 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
HMGN1P37-201ENST00000413805 COL24A1Q17RW2 1714 aa15.16■□□□□ 0.02
HMGN1P37-201ENST00000413805 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
HMGN1P37-201ENST00000413805 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
HMGN1P37-201ENST00000413805 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
HMGN1P37-201ENST00000413805 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
HMGN1P37-201ENST00000413805 RFC4P35249 363 aa15.14■□□□□ 0.01
HMGN1P37-201ENST00000413805 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
HMGN1P37-201ENST00000413805 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
HMGN1P37-201ENST00000413805 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
HMGN1P37-201ENST00000413805 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
HMGN1P37-201ENST00000413805 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
HMGN1P37-201ENST00000413805 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
HMGN1P37-201ENST00000413805 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
HMGN1P37-201ENST00000413805 MMP10P09238 476 aa15.11■□□□□ 0.01
HMGN1P37-201ENST00000413805 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
HMGN1P37-201ENST00000413805 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
HMGN1P37-201ENST00000413805 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
HMGN1P37-201ENST00000413805 CHD4Q14839 1912 aa15.11■□□□□ 0.01
HMGN1P37-201ENST00000413805 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
HMGN1P37-201ENST00000413805 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
HMGN1P37-201ENST00000413805 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 PPP2R1AP30153 589 aa15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 NLGN1Q8N2Q7 840 aa15.09■□□□□ 0.01
HMGN1P37-201ENST00000413805 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 PRKAR2BP31323 418 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 TEFQ10587 303 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 ZNF784Q8NCA9 323 aaPredicted RBP15.08■□□□□ 0
HMGN1P37-201ENST00000413805 GAS2L2Q8NHY3 880 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 PARP3Q9Y6F1 533 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0
HMGN1P37-201ENST00000413805 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0
HMGN1P37-201ENST00000413805 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
HMGN1P37-201ENST00000413805 TJP1Q07157 1748 aa15.06■□□□□ 0
HMGN1P37-201ENST00000413805 MYH14Q7Z406 1995 aaKnown RBP15.06■□□□□ 0
HMGN1P37-201ENST00000413805 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
HMGN1P37-201ENST00000413805 ZPR1O75312 459 aa15.05■□□□□ -0
HMGN1P37-201ENST00000413805 GYS1P13807 737 aa15.05■□□□□ -0
HMGN1P37-201ENST00000413805 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
HMGN1P37-201ENST00000413805 CICQ96RK0 1608 aaPredicted RBP15.04■□□□□ -0
HMGN1P37-201ENST00000413805 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
HMGN1P37-201ENST00000413805 INTS5Q6P9B9 1019 aaKnown RBP15.04■□□□□ -0
HMGN1P37-201ENST00000413805 IL17REQ8NFR9 667 aa15.04■□□□□ -0
HMGN1P37-201ENST00000413805 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
HMGN1P37-201ENST00000413805 UTRNP46939 3433 aa15.04■□□□□ -0
HMGN1P37-201ENST00000413805 C4AP0C0L4 1744 aa15.03■□□□□ -0
HMGN1P37-201ENST00000413805 NEFMP07197 916 aa15.03■□□□□ -0
HMGN1P37-201ENST00000413805 CYP19A1P11511 503 aaPredicted RBP15.03■□□□□ -0
HMGN1P37-201ENST00000413805 RTF1Q92541 710 aaKnown RBP15.03■□□□□ -0
HMGN1P37-201ENST00000413805 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
HMGN1P37-201ENST00000413805 MRC1P22897 1456 aa15.02■□□□□ -0
HMGN1P37-201ENST00000413805 A0A0G2JLW4 131 aa15.02■□□□□ -0
HMGN1P37-201ENST00000413805 FKBP8Q14318 412 aa15.02■□□□□ -0
HMGN1P37-201ENST00000413805 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
HMGN1P37-201ENST00000413805 GOLGB1Q14789 3259 aaKnown RBP15.02□□□□□ -0.01
HMGN1P37-201ENST00000413805 BTBD11A6QL63 1104 aa15.01□□□□□ -0.01
HMGN1P37-201ENST00000413805 STARD3NLO95772 234 aa15.01□□□□□ -0.01
HMGN1P37-201ENST00000413805 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
HMGN1P37-201ENST00000413805 KCPQ6ZWJ8 1503 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms