RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-203ENST00000413184 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
CPSF7-203ENST00000413184 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
CPSF7-203ENST00000413184 MKI67P46013 3256 aaKnown RBP10.88□□□□□ -0.67
CPSF7-203ENST00000413184 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 IL2RBP14784 551 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-203ENST00000413184 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
CPSF7-203ENST00000413184 ANKRD36BQ8N2N9 1353 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 UBR3Q6ZT12 1888 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 C4BP0C0L5 1744 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
CPSF7-203ENST00000413184 NSD2O96028 1365 aa10.86□□□□□ -0.67
CPSF7-203ENST00000413184 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
CPSF7-203ENST00000413184 SLIT3O75094 1523 aa10.85□□□□□ -0.67
CPSF7-203ENST00000413184 SSFA2P28290 1259 aa10.85□□□□□ -0.67
CPSF7-203ENST00000413184 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-203ENST00000413184 CTU1Q7Z7A3 348 aaKnown RBP10.85□□□□□ -0.67
CPSF7-203ENST00000413184 CNTROBQ8N137 903 aa10.85□□□□□ -0.67
CPSF7-203ENST00000413184 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-203ENST00000413184 DDNO94850 711 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-203ENST00000413184 CIAPIN1Q6FI81 312 aa10.84□□□□□ -0.67
CPSF7-203ENST00000413184 POLR3AO14802 1390 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-203ENST00000413184 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-203ENST00000413184 TAF1DQ9H5J8 278 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-203ENST00000413184 RAPGEFL1Q9UHV5 662 aa10.83□□□□□ -0.68
CPSF7-203ENST00000413184 CEP290O15078 2479 aa10.83□□□□□ -0.68
CPSF7-203ENST00000413184 ACEP12821 1306 aa10.83□□□□□ -0.68
CPSF7-203ENST00000413184 ERFEQ4G0M1 354 aa10.82□□□□□ -0.68
CPSF7-203ENST00000413184 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
CPSF7-203ENST00000413184 DDX21Q9NR30 783 aaKnown RBP eCLIP10.82□□□□□ -0.68
CPSF7-203ENST00000413184 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
CPSF7-203ENST00000413184 SCN4AP35499 1836 aa10.81□□□□□ -0.68
CPSF7-203ENST00000413184 C4AP0C0L4 1744 aa10.81□□□□□ -0.68
CPSF7-203ENST00000413184 CHRNA5P30532 468 aa10.81□□□□□ -0.68
CPSF7-203ENST00000413184 NLRP2Q9NX02 1062 aa10.81□□□□□ -0.68
CPSF7-203ENST00000413184 PARP3Q9Y6F1 533 aa10.81□□□□□ -0.68
CPSF7-203ENST00000413184 NLGN1Q8N2Q7 840 aa10.8□□□□□ -0.68
CPSF7-203ENST00000413184 CCDC24Q8N4L8 307 aa10.8□□□□□ -0.68
CPSF7-203ENST00000413184 NUDT16Q96DE0 195 aaKnown RBP10.8□□□□□ -0.68
CPSF7-203ENST00000413184 VCANP13611 3396 aa10.79□□□□□ -0.68
CPSF7-203ENST00000413184 NLRP6P59044 892 aa10.79□□□□□ -0.68
CPSF7-203ENST00000413184 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
CPSF7-203ENST00000413184 TLL2Q9Y6L7 1015 aa10.79□□□□□ -0.68
CPSF7-203ENST00000413184 DICER1Q9UPY3 1922 aaKnown RBP10.78□□□□□ -0.68
CPSF7-203ENST00000413184 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
CPSF7-203ENST00000413184 TMF1P82094 1093 aa10.78□□□□□ -0.68
CPSF7-203ENST00000413184 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
CPSF7-203ENST00000413184 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
CPSF7-203ENST00000413184 PKN2Q16513 984 aaKnown RBP10.77□□□□□ -0.69
CPSF7-203ENST00000413184 PCGF6Q9BYE7 350 aa10.77□□□□□ -0.69
CPSF7-203ENST00000413184 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
CPSF7-203ENST00000413184 ADAMTSL1Q8N6G6 1762 aa10.76□□□□□ -0.69
CPSF7-203ENST00000413184 NFKBIEO00221 500 aa10.76□□□□□ -0.69
CPSF7-203ENST00000413184 AKAP4Q5JQC9 854 aa10.76□□□□□ -0.69
CPSF7-203ENST00000413184 ARHGEF25Q86VW2 580 aa10.76□□□□□ -0.69
CPSF7-203ENST00000413184 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPSF7-203ENST00000413184 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
CPSF7-203ENST00000413184 GNPATO15228 680 aa10.75□□□□□ -0.69
CPSF7-203ENST00000413184 SOX12O15370 315 aa10.75□□□□□ -0.69
CPSF7-203ENST00000413184 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
CPSF7-203ENST00000413184 TRPM7Q96QT4 1865 aa10.74□□□□□ -0.69
CPSF7-203ENST00000413184 EPHX2P34913 555 aa10.74□□□□□ -0.69
CPSF7-203ENST00000413184 FMR1Q06787 632 aaKnown RBP eCLIP10.74□□□□□ -0.69
CPSF7-203ENST00000413184 PNMA8AQ86V59 439 aaPredicted RBP10.74□□□□□ -0.69
CPSF7-203ENST00000413184 SAGE1Q9NXZ1 904 aa10.74□□□□□ -0.69
CPSF7-203ENST00000413184 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
CPSF7-203ENST00000413184 HACL1Q9UJ83 578 aa10.74□□□□□ -0.69
CPSF7-203ENST00000413184 RANBP2P49792 3224 aaKnown RBP10.73□□□□□ -0.69
CPSF7-203ENST00000413184 BRCA2P51587 3418 aa10.72□□□□□ -0.69
CPSF7-203ENST00000413184 H0YGN5 161 aa10.72□□□□□ -0.69
CPSF7-203ENST00000413184 FAM50AQ14320 339 aaKnown RBP10.72□□□□□ -0.69
CPSF7-203ENST00000413184 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
CPSF7-203ENST00000413184 CST9Q5W186 159 aa10.72□□□□□ -0.69
CPSF7-203ENST00000413184 C14orf93Q9H972 538 aaKnown RBP10.72□□□□□ -0.69
CPSF7-203ENST00000413184 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
CPSF7-203ENST00000413184 TRPA1O75762 1119 aa10.71□□□□□ -0.69
CPSF7-203ENST00000413184 NOGQ13253 232 aa10.71□□□□□ -0.69
CPSF7-203ENST00000413184 SAPCD2Q86UD0 394 aa10.71□□□□□ -0.69
CPSF7-203ENST00000413184 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 CFAP70Q5T0N1 1121 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 ZIC5Q96T25 663 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 HDAC9Q9UKV0 1011 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
CPSF7-203ENST00000413184 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 TRIM26Q12899 539 aaPredicted RBP10.69□□□□□ -0.7
CPSF7-203ENST00000413184 TRAPPC3LQ5T215 181 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 TTLL6Q8N841 843 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 HHIPL1Q96JK4 782 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
CPSF7-203ENST00000413184 RNF186Q9NXI6 227 aa10.68□□□□□ -0.7
CPSF7-203ENST00000413184 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
CPSF7-203ENST00000413184 TRAF5O00463 557 aa10.67□□□□□ -0.7
CPSF7-203ENST00000413184 GYS1P13807 737 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms