RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 TUBGCP6Q96RT7 1819 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 FER1L4A9Z1Z3 1794 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 ZNF445P59923 1031 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 CAVIN1Q6NZI2 390 aaKnown RBP23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 LRRCC1Q9C099 1032 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
TNFRSF8-202ENST00000413146 GNAI3P08754 354 aa23.25■■□□□ 1.31
TNFRSF8-202ENST00000413146 LTKP29376 864 aa23.25■■□□□ 1.31
TNFRSF8-202ENST00000413146 EYA1Q99502 592 aa23.25■■□□□ 1.31
TNFRSF8-202ENST00000413146 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 XRN1Q8IZH2 1706 aaKnown RBP23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 FLIIQ13045 1269 aa23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 FKBP5Q13451 457 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 CCDC30Q5VVM6 783 aa23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 PPP1R9BQ96SB3 815 aa23.24■■□□□ 1.31
TNFRSF8-202ENST00000413146 ZSCAN23Q3MJ62 389 aa23.23■■□□□ 1.31
TNFRSF8-202ENST00000413146 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
TNFRSF8-202ENST00000413146 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
TNFRSF8-202ENST00000413146 SALL3Q9BXA9 1300 aa23.23■■□□□ 1.31
TNFRSF8-202ENST00000413146 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 MX1P20591 662 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 MCCP23508 829 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 TSHZ3Q63HK5 1081 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 ESYT1Q9BSJ8 1104 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 CACNA1FO60840 1977 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 NEK4P51957 841 aa23.22■■□□□ 1.31
TNFRSF8-202ENST00000413146 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 PRPF40AO75400 957 aaKnown RBP23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 MCM2P49736 904 aa23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 ZDHHC9Q9Y397 364 aa23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 N4BP2Q86UW6 1770 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF8-202ENST00000413146 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
TNFRSF8-202ENST00000413146 ATP8B2P98198 1209 aa23.2■■□□□ 1.3
TNFRSF8-202ENST00000413146 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
TNFRSF8-202ENST00000413146 PNMA6EA0A0J9YXQ4 647 aa23.19■■□□□ 1.3
TNFRSF8-202ENST00000413146 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
TNFRSF8-202ENST00000413146 EID1Q9Y6B2 187 aa23.19■■□□□ 1.3
TNFRSF8-202ENST00000413146 TMX3Q96JJ7 454 aa23.19■■□□□ 1.3
TNFRSF8-202ENST00000413146 TRIM6-TRIM34B2RNG4 842 aa23.18■■□□□ 1.3
TNFRSF8-202ENST00000413146 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
TNFRSF8-202ENST00000413146 RILPL2Q969X0 211 aa23.18■■□□□ 1.3
TNFRSF8-202ENST00000413146 SRCIN1Q9C0H9 1055 aa23.18■■□□□ 1.3
TNFRSF8-202ENST00000413146 SOS1Q07889 1333 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF8-202ENST00000413146 PXDNLA1KZ92 1463 aa23.17■■□□□ 1.3
TNFRSF8-202ENST00000413146 ANO2Q9NQ90 1003 aa23.16■■□□□ 1.3
TNFRSF8-202ENST00000413146 CHMLP26374 656 aa23.16■■□□□ 1.3
TNFRSF8-202ENST00000413146 ANAPC15P60006 121 aa23.16■■□□□ 1.3
TNFRSF8-202ENST00000413146 GPT2Q8TD30 523 aa23.16■■□□□ 1.3
TNFRSF8-202ENST00000413146 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
TNFRSF8-202ENST00000413146 STAP2Q9UGK3 403 aa23.15■■□□□ 1.3
TNFRSF8-202ENST00000413146 MAP3K5Q99683 1374 aa23.15■■□□□ 1.3
TNFRSF8-202ENST00000413146 NLRP6P59044 892 aa23.14■■□□□ 1.3
TNFRSF8-202ENST00000413146 ZSCAN30Q86W11 494 aa23.14■■□□□ 1.3
TNFRSF8-202ENST00000413146 RBM27Q9P2N5 1060 aaKnown RBP23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 PALD1Q9ULE6 856 aa23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 CUL4AQ13619 759 aa23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 FOXD4L5Q5VV16 416 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 FOXD4L4Q8WXT5 416 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF8-202ENST00000413146 AOX1Q06278 1338 aa23.12■■□□□ 1.29
TNFRSF8-202ENST00000413146 HOXC9P31274 260 aa23.12■■□□□ 1.29
TNFRSF8-202ENST00000413146 RBSNQ9H1K0 784 aa23.12■■□□□ 1.29
TNFRSF8-202ENST00000413146 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
TNFRSF8-202ENST00000413146 BABAM1Q9NWV8 329 aa23.12■■□□□ 1.29
TNFRSF8-202ENST00000413146 TAF7Q15545 349 aaPredicted RBP23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 NWD1Q149M9 1564 aa23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 MBD3O95983 291 aa23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 MSNP26038 577 aaKnown RBP23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 INTS4Q96HW7 963 aaKnown RBP23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 TBX22Q9Y458 520 aa23.11■■□□□ 1.29
TNFRSF8-202ENST00000413146 BRD1O95696 1058 aa23.1■■□□□ 1.29
TNFRSF8-202ENST00000413146 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
TNFRSF8-202ENST00000413146 CHAMP1Q96JM3 812 aa23.1■■□□□ 1.29
TNFRSF8-202ENST00000413146 USP44Q9H0E7 712 aa23.1■■□□□ 1.29
TNFRSF8-202ENST00000413146 SLIT1O75093 1534 aa23.1■■□□□ 1.29
TNFRSF8-202ENST00000413146 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
TNFRSF8-202ENST00000413146 TMEM63CQ9P1W3 806 aa23.09■■□□□ 1.29
TNFRSF8-202ENST00000413146 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
TNFRSF8-202ENST00000413146 HDGFL1Q5TGJ6 251 aa23.08■■□□□ 1.29
TNFRSF8-202ENST00000413146 LRSAM1Q6UWE0 723 aa23.08■■□□□ 1.29
TNFRSF8-202ENST00000413146 UNC5CLQ8IV45 518 aa23.08■■□□□ 1.29
TNFRSF8-202ENST00000413146 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF8-202ENST00000413146 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
TNFRSF8-202ENST00000413146 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 SSH3Q8TE77 659 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 IL17RAQ96F46 866 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 ARHGAP23Q9P227 1491 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 HS1BP3Q53T59 392 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 LTV1Q96GA3 475 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 ANKARQ7Z5J8 1434 aa23.07■■□□□ 1.28
TNFRSF8-202ENST00000413146 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
TNFRSF8-202ENST00000413146 SYCE3A1L190 88 aa23.06■■□□□ 1.28
TNFRSF8-202ENST00000413146 EPB41L2O43491 1005 aaKnown RBP23.06■■□□□ 1.28
TNFRSF8-202ENST00000413146 RAB11FIP3O75154 756 aa23.06■■□□□ 1.28
TNFRSF8-202ENST00000413146 UPF3BQ9BZI7 483 aaKnown RBP23.06■■□□□ 1.28
TNFRSF8-202ENST00000413146 UBE2Q2Q8WVN8 375 aa23.05■■□□□ 1.28
TNFRSF8-202ENST00000413146 PDLIM2Q96JY6 352 aa23.05■■□□□ 1.28
TNFRSF8-202ENST00000413146 NSFL1CQ9UNZ2 370 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms