RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
TRAFD1-202ENST00000412615 RABEP1Q15276 862 aa14.17□□□□□ -0.14
TRAFD1-202ENST00000412615 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
TRAFD1-202ENST00000412615 LTN1O94822 1766 aa14.16□□□□□ -0.14
TRAFD1-202ENST00000412615 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
TRAFD1-202ENST00000412615 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
TRAFD1-202ENST00000412615 DDX11L8A8MPP1 907 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 CD2BP2O95400 341 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 HOXB7P09629 217 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 PDE1AP54750 535 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 LRRCC1Q9C099 1032 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 CACNA1FO60840 1977 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 REC8O95072 547 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
TRAFD1-202ENST00000412615 NPHP4O75161 1426 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-202ENST00000412615 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-202ENST00000412615 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
TRAFD1-202ENST00000412615 GCP02774 474 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 UBTFL1P0CB47 393 aaPredicted RBP14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 USP44Q9H0E7 712 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 PNMA6EA0A0J9YXQ4 647 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 TRAK2O60296 914 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 TEFQ10587 303 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 RAB3GAP1Q15042 981 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 BRPF3Q9ULD4 1205 aa14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 LRRFIP2Q9Y608 721 aaKnown RBP14.13□□□□□ -0.15
TRAFD1-202ENST00000412615 ERC2O15083 957 aa14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 ORAI2Q96SN7 254 aa14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 IBTKQ9P2D0 1353 aaPredicted RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 SETD1BQ9UPS6 1966 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 ZNF530Q6P9A1 599 aaPredicted RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-202ENST00000412615 EIF2S2P20042 333 aaKnown RBP14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 SRCIN1Q9C0H9 1055 aa14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 SALL3Q9BXA9 1300 aa14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 MED1Q15648 1581 aaPredicted RBP14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 ADAMTSL3P82987 1691 aa14.11□□□□□ -0.15
TRAFD1-202ENST00000412615 MX1P20591 662 aa14.1□□□□□ -0.15
TRAFD1-202ENST00000412615 PTMSP20962 102 aa14.1□□□□□ -0.15
TRAFD1-202ENST00000412615 C1orf141Q5JVX7 400 aa14.1□□□□□ -0.15
TRAFD1-202ENST00000412615 SSH3Q8TE77 659 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 ST18O60284 1047 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 LMOD2Q6P5Q4 547 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 STAP2Q9UGK3 403 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 SLIT3O75094 1523 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 NCAPD2Q15021 1401 aa14.09□□□□□ -0.15
TRAFD1-202ENST00000412615 RAB11FIP3O75154 756 aa14.08□□□□□ -0.15
TRAFD1-202ENST00000412615 XPCQ01831 940 aaPredicted RBP14.08□□□□□ -0.15
TRAFD1-202ENST00000412615 MPRIPQ6WCQ1 1025 aa14.08□□□□□ -0.15
TRAFD1-202ENST00000412615 ANKRD24Q8TF21 1146 aa14.08□□□□□ -0.15
TRAFD1-202ENST00000412615 CHPF2Q9P2E5 772 aa14.08□□□□□ -0.15
TRAFD1-202ENST00000412615 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
TRAFD1-202ENST00000412615 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
TRAFD1-202ENST00000412615 KCNQ3O43525 872 aa14.08□□□□□ -0.16
TRAFD1-202ENST00000412615 KRT28Q7Z3Y7 464 aa14.08□□□□□ -0.16
TRAFD1-202ENST00000412615 AOX1Q06278 1338 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 PROSER2Q86WR7 435 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 GZF1Q9H116 711 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 LMO7Q8WWI1 1683 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 PI4KAP2A4QPH2 592 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 POLA2Q14181 598 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 SKOR2Q2VWA4 1001 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 BEND3Q5T5X7 828 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 PPP1R42Q7Z4L9 355 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 PI4KAP1Q8N8J0 262 aa14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-202ENST00000412615 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 TSHZ3Q63HK5 1081 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 SURF6O75683 361 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 ESYT1Q9BSJ8 1104 aa14.06□□□□□ -0.16
TRAFD1-202ENST00000412615 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 C19orf44Q9H6X5 657 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 RGPD2P0DJD1 1756 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 MCCP23508 829 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 NUCB2P80303 420 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 CWC22Q9HCG8 908 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-202ENST00000412615 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
TRAFD1-202ENST00000412615 NBPF7P0C2Y1 421 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms