RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
DDR1-230ENST00000412274 U2AF1L5P0DN76 240 aaPredicted RBP21.63■■□□□ 1.05
DDR1-230ENST00000412274 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
DDR1-230ENST00000412274 U2AF1Q01081 240 aaKnown RBP eCLIP21.63■■□□□ 1.05
DDR1-230ENST00000412274 AK7Q96M32 723 aa21.63■■□□□ 1.05
DDR1-230ENST00000412274 PDGFDQ9GZP0 370 aaPredicted RBP21.63■■□□□ 1.05
DDR1-230ENST00000412274 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
DDR1-230ENST00000412274 SLC52A2Q9HAB3 445 aa21.63■■□□□ 1.05
DDR1-230ENST00000412274 TAF1LQ8IZX4 1826 aa21.63■■□□□ 1.05
DDR1-230ENST00000412274 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
DDR1-230ENST00000412274 GNAT3A8MTJ3 354 aa21.61■■□□□ 1.05
DDR1-230ENST00000412274 NEFMP07197 916 aa21.61■■□□□ 1.05
DDR1-230ENST00000412274 C4BP0C0L5 1744 aa21.6■■□□□ 1.05
DDR1-230ENST00000412274 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
DDR1-230ENST00000412274 PTGER2P43116 358 aa21.6■■□□□ 1.05
DDR1-230ENST00000412274 ATF5Q9Y2D1 282 aaPredicted RBP21.6■■□□□ 1.05
DDR1-230ENST00000412274 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
DDR1-230ENST00000412274 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
DDR1-230ENST00000412274 MRC1P22897 1456 aa21.59■■□□□ 1.05
DDR1-230ENST00000412274 SSFA2P28290 1259 aa21.59■■□□□ 1.05
DDR1-230ENST00000412274 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
DDR1-230ENST00000412274 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
DDR1-230ENST00000412274 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
DDR1-230ENST00000412274 POLD1P28340 1107 aa21.58■■□□□ 1.05
DDR1-230ENST00000412274 SGIP1Q9BQI5 828 aa21.57■■□□□ 1.04
DDR1-230ENST00000412274 TUBGCP6Q96RT7 1819 aa21.57■■□□□ 1.04
DDR1-230ENST00000412274 MYBBP1AQ9BQG0 1328 aaKnown RBP21.56■■□□□ 1.04
DDR1-230ENST00000412274 MSH5O43196 834 aa21.56■■□□□ 1.04
DDR1-230ENST00000412274 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
DDR1-230ENST00000412274 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
DDR1-230ENST00000412274 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
DDR1-230ENST00000412274 TEFQ10587 303 aa21.55■■□□□ 1.04
DDR1-230ENST00000412274 ITPK1Q13572 414 aa21.55■■□□□ 1.04
DDR1-230ENST00000412274 ARXQ96QS3 562 aa21.55■■□□□ 1.04
DDR1-230ENST00000412274 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
DDR1-230ENST00000412274 PHACTR3Q96KR7 559 aa21.54■■□□□ 1.04
DDR1-230ENST00000412274 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
DDR1-230ENST00000412274 CNTNAP4Q9C0A0 1308 aa21.54■■□□□ 1.04
DDR1-230ENST00000412274 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
DDR1-230ENST00000412274 PTCD1O75127 700 aaKnown RBP21.53■■□□□ 1.04
DDR1-230ENST00000412274 ADRA2BP18089 450 aa21.53■■□□□ 1.04
DDR1-230ENST00000412274 VSIG10Q8N0Z9 540 aa21.53■■□□□ 1.04
DDR1-230ENST00000412274 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
DDR1-230ENST00000412274 CEMIPQ8WUJ3 1361 aa21.52■■□□□ 1.04
DDR1-230ENST00000412274 CICQ96RK0 1608 aaPredicted RBP21.52■■□□□ 1.04
DDR1-230ENST00000412274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.52■■□□□ 1.04
DDR1-230ENST00000412274 GNPATO15228 680 aa21.52■■□□□ 1.04
DDR1-230ENST00000412274 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
DDR1-230ENST00000412274 SLC4A9Q96Q91 983 aa21.52■■□□□ 1.04
DDR1-230ENST00000412274 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
DDR1-230ENST00000412274 UBR3Q6ZT12 1888 aa21.52■■□□□ 1.03
DDR1-230ENST00000412274 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
DDR1-230ENST00000412274 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
DDR1-230ENST00000412274 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
DDR1-230ENST00000412274 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
DDR1-230ENST00000412274 PHF14O94880 888 aa21.48■■□□□ 1.03
DDR1-230ENST00000412274 TEX13AQ9BXU3 409 aaPredicted RBP21.48■■□□□ 1.03
DDR1-230ENST00000412274 PRKRIP1Q9H875 184 aaPredicted RBP21.48■■□□□ 1.03
DDR1-230ENST00000412274 ZNF316A6NFI3 1004 aaPredicted RBP21.47■■□□□ 1.03
DDR1-230ENST00000412274 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
DDR1-230ENST00000412274 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
DDR1-230ENST00000412274 SLC39A6Q13433 755 aa21.46■■□□□ 1.03
DDR1-230ENST00000412274 ZNF790Q6PG37 636 aa21.46■■□□□ 1.03
DDR1-230ENST00000412274 SYT17Q9BSW7 474 aa21.46■■□□□ 1.03
DDR1-230ENST00000412274 FHDC1Q9C0D6 1143 aaPredicted RBP21.46■■□□□ 1.03
DDR1-230ENST00000412274 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
DDR1-230ENST00000412274 SIPA1L3O60292 1781 aaPredicted RBP21.44■■□□□ 1.02
DDR1-230ENST00000412274 BTBD11A6QL63 1104 aa21.44■■□□□ 1.02
DDR1-230ENST00000412274 STARD3NLO95772 234 aa21.44■■□□□ 1.02
DDR1-230ENST00000412274 KCPQ6ZWJ8 1503 aa21.44■■□□□ 1.02
DDR1-230ENST00000412274 RFC4P35249 363 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 NFE2L2Q16236 605 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 NLGN1Q8N2Q7 840 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 TJP1Q07157 1748 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 UBR2Q8IWV8 1755 aa21.43■■□□□ 1.02
DDR1-230ENST00000412274 CYP19A1P11511 503 aaPredicted RBP21.42■■□□□ 1.02
DDR1-230ENST00000412274 WDR43Q15061 677 aaKnown RBP eCLIP21.42■■□□□ 1.02
DDR1-230ENST00000412274 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
DDR1-230ENST00000412274 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
DDR1-230ENST00000412274 CCDC87Q9NVE4 849 aa21.42■■□□□ 1.02
DDR1-230ENST00000412274 PNISRQ8TF01 805 aaKnown RBP21.41■■□□□ 1.02
DDR1-230ENST00000412274 ARHGEF1Q92888 912 aaKnown RBP21.41■■□□□ 1.02
DDR1-230ENST00000412274 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
DDR1-230ENST00000412274 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
DDR1-230ENST00000412274 MSL1Q68DK7 614 aa21.4■■□□□ 1.02
DDR1-230ENST00000412274 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
DDR1-230ENST00000412274 MCM10Q7L590 875 aa21.4■■□□□ 1.02
DDR1-230ENST00000412274 LMOD3Q0VAK6 560 aa21.39■■□□□ 1.01
DDR1-230ENST00000412274 CD2APQ9Y5K6 639 aa21.39■■□□□ 1.01
DDR1-230ENST00000412274 ZNF496Q96IT1 587 aaPredicted RBP21.38■■□□□ 1.01
DDR1-230ENST00000412274 MYH14Q7Z406 1995 aaKnown RBP21.37■■□□□ 1.01
DDR1-230ENST00000412274 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
DDR1-230ENST00000412274 A0A087WZG4 1122 aa21.35■■□□□ 1.01
DDR1-230ENST00000412274 ZPR1O75312 459 aa21.35■■□□□ 1.01
DDR1-230ENST00000412274 GYS1P13807 737 aa21.35■■□□□ 1.01
DDR1-230ENST00000412274 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
DDR1-230ENST00000412274 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
DDR1-230ENST00000412274 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
DDR1-230ENST00000412274 DCTN1Q14203 1278 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms