RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 DCTN1Q14203 1278 aa13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 NOB1Q9ULX3 412 aaKnown RBP13.47□□□□□ -0.25
RN7SKP228-201ENST00000411042 PTPRCP08575 1304 aa13.46□□□□□ -0.25
RN7SKP228-201ENST00000411042 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
RN7SKP228-201ENST00000411042 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
RN7SKP228-201ENST00000411042 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
RN7SKP228-201ENST00000411042 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 TOM1O60784 492 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
RN7SKP228-201ENST00000411042 ABCC4O15439 1325 aa13.44□□□□□ -0.26
RN7SKP228-201ENST00000411042 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
RN7SKP228-201ENST00000411042 RLBP1P12271 317 aa13.44□□□□□ -0.26
RN7SKP228-201ENST00000411042 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
RN7SKP228-201ENST00000411042 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
RN7SKP228-201ENST00000411042 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
RN7SKP228-201ENST00000411042 ABCA3Q99758 1704 aa13.43□□□□□ -0.26
RN7SKP228-201ENST00000411042 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
RN7SKP228-201ENST00000411042 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP228-201ENST00000411042 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
RN7SKP228-201ENST00000411042 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
RN7SKP228-201ENST00000411042 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
RN7SKP228-201ENST00000411042 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
RN7SKP228-201ENST00000411042 PRDM11Q9NQV5 511 aa13.42□□□□□ -0.26
RN7SKP228-201ENST00000411042 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
RN7SKP228-201ENST00000411042 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 TEFQ10587 303 aa13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
RN7SKP228-201ENST00000411042 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
RN7SKP228-201ENST00000411042 ZBTB7CA1YPR0 619 aa13.4□□□□□ -0.26
RN7SKP228-201ENST00000411042 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
RN7SKP228-201ENST00000411042 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
RN7SKP228-201ENST00000411042 STK31Q9BXU1 1019 aa13.4□□□□□ -0.26
RN7SKP228-201ENST00000411042 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 COL5A2P05997 1499 aaPredicted RBP13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 SIPA1L3O60292 1781 aaPredicted RBP13.39□□□□□ -0.27
RN7SKP228-201ENST00000411042 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 ZBTB7BO15156 539 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 PARP4Q9UKK3 1724 aaKnown RBP13.38□□□□□ -0.27
RN7SKP228-201ENST00000411042 MRC1P22897 1456 aa13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 PHKG2P15735 406 aa13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 COL14A1Q05707 1796 aaKnown RBP13.37□□□□□ -0.27
RN7SKP228-201ENST00000411042 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP228-201ENST00000411042 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
RN7SKP228-201ENST00000411042 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
RN7SKP228-201ENST00000411042 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 MEGF6O75095 1541 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 HSPA1LP34931 641 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
RN7SKP228-201ENST00000411042 RGS12O14924 1447 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 IGHDP01880 384 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
RN7SKP228-201ENST00000411042 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
RN7SKP228-201ENST00000411042 IL2RBP14784 551 aa13.33□□□□□ -0.28
RN7SKP228-201ENST00000411042 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
RN7SKP228-201ENST00000411042 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
RN7SKP228-201ENST00000411042 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
RN7SKP228-201ENST00000411042 CYP27B1O15528 508 aa13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 EVA1CP58658 441 aa13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 GSE1Q14687 1217 aa13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 CDCA7Q9BWT1 371 aaPredicted RBP13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
RN7SKP228-201ENST00000411042 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms