RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-208ENST00000410011 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 SRCIN1Q9C0H9 1055 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
LIMS2-208ENST00000410011 CEP170BQ9Y4F5 1589 aaPredicted RBP20.43■□□□□ 0.86
LIMS2-208ENST00000410011 FLIIQ13045 1269 aa20.43■□□□□ 0.86
LIMS2-208ENST00000410011 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
LIMS2-208ENST00000410011 AMPHP49418 695 aa20.43■□□□□ 0.86
LIMS2-208ENST00000410011 AMOTL2Q9Y2J4 779 aa20.43■□□□□ 0.86
LIMS2-208ENST00000410011 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
LIMS2-208ENST00000410011 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 APBB1O00213 710 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 AOX1Q06278 1338 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 KIF13AQ9H1H9 1805 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 NUTM2FA1L443 756 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
LIMS2-208ENST00000410011 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
LIMS2-208ENST00000410011 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
LIMS2-208ENST00000410011 ESYT1Q9BSJ8 1104 aa20.41■□□□□ 0.86
LIMS2-208ENST00000410011 USP54Q70EL1 1684 aa20.41■□□□□ 0.86
LIMS2-208ENST00000410011 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
LIMS2-208ENST00000410011 NASPP49321 788 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-208ENST00000410011 MX1P20591 662 aa20.4■□□□□ 0.86
LIMS2-208ENST00000410011 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
LIMS2-208ENST00000410011 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
LIMS2-208ENST00000410011 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
LIMS2-208ENST00000410011 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
LIMS2-208ENST00000410011 DIP2AQ14689 1571 aa20.4■□□□□ 0.86
LIMS2-208ENST00000410011 MCCP23508 829 aa20.39■□□□□ 0.85
LIMS2-208ENST00000410011 CUL4AQ13619 759 aa20.39■□□□□ 0.85
LIMS2-208ENST00000410011 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
LIMS2-208ENST00000410011 ANP32BQ92688 251 aaKnown RBP20.39■□□□□ 0.85
LIMS2-208ENST00000410011 INTS4Q96HW7 963 aaKnown RBP20.39■□□□□ 0.85
LIMS2-208ENST00000410011 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
LIMS2-208ENST00000410011 EXOC6BQ9Y2D4 811 aa20.38■□□□□ 0.85
LIMS2-208ENST00000410011 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
LIMS2-208ENST00000410011 PKP1Q13835 747 aa20.38■□□□□ 0.85
LIMS2-208ENST00000410011 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
LIMS2-208ENST00000410011 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 AK9Q5TCS8 1911 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-208ENST00000410011 SOX12O15370 315 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 CHMLP26374 656 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 ZSCAN23Q3MJ62 389 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
LIMS2-208ENST00000410011 PNMA6EA0A0J9YXQ4 647 aa20.36■□□□□ 0.85
LIMS2-208ENST00000410011 HOXC9P31274 260 aa20.36■□□□□ 0.85
LIMS2-208ENST00000410011 HS1BP3Q53T59 392 aa20.36■□□□□ 0.85
LIMS2-208ENST00000410011 NEK4P51957 841 aa20.36■□□□□ 0.85
LIMS2-208ENST00000410011 IL17REQ8NFR9 667 aa20.35■□□□□ 0.85
LIMS2-208ENST00000410011 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
LIMS2-208ENST00000410011 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
LIMS2-208ENST00000410011 USP44Q9H0E7 712 aa20.35■□□□□ 0.85
LIMS2-208ENST00000410011 NLRP6P59044 892 aa20.34■□□□□ 0.85
LIMS2-208ENST00000410011 CAVIN1Q6NZI2 390 aaKnown RBP20.34■□□□□ 0.85
LIMS2-208ENST00000410011 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
LIMS2-208ENST00000410011 BRD1O95696 1058 aa20.33■□□□□ 0.84
LIMS2-208ENST00000410011 PRPF40AO75400 957 aaKnown RBP20.32■□□□□ 0.84
LIMS2-208ENST00000410011 RGPD8O14715 1765 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-208ENST00000410011 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
LIMS2-208ENST00000410011 GPT2Q8TD30 523 aa20.32■□□□□ 0.84
LIMS2-208ENST00000410011 LRRFIP2Q9Y608 721 aaKnown RBP20.32■□□□□ 0.84
LIMS2-208ENST00000410011 MBD3O95983 291 aa20.31■□□□□ 0.84
LIMS2-208ENST00000410011 ZSCAN30Q86W11 494 aa20.31■□□□□ 0.84
LIMS2-208ENST00000410011 HOXB7P09629 217 aa20.31■□□□□ 0.84
LIMS2-208ENST00000410011 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
LIMS2-208ENST00000410011 POLA2Q14181 598 aa20.31■□□□□ 0.84
LIMS2-208ENST00000410011 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
LIMS2-208ENST00000410011 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
LIMS2-208ENST00000410011 NAP1L5Q96NT1 182 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-208ENST00000410011 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
LIMS2-208ENST00000410011 THEMISQ8N1K5 641 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-208ENST00000410011 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
LIMS2-208ENST00000410011 ANO2Q9NQ90 1003 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 LRSAM1Q6UWE0 723 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 PALD1Q9ULE6 856 aa20.28■□□□□ 0.84
LIMS2-208ENST00000410011 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
LIMS2-208ENST00000410011 HSPA4P34932 840 aa20.27■□□□□ 0.84
LIMS2-208ENST00000410011 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.84
LIMS2-208ENST00000410011 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
LIMS2-208ENST00000410011 RBSNQ9H1K0 784 aa20.27■□□□□ 0.84
LIMS2-208ENST00000410011 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
LIMS2-208ENST00000410011 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
LIMS2-208ENST00000410011 UNC5CLQ8IV45 518 aa20.25■□□□□ 0.83
LIMS2-208ENST00000410011 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
LIMS2-208ENST00000410011 TMEM63CQ9P1W3 806 aa20.25■□□□□ 0.83
LIMS2-208ENST00000410011 PPP1R42Q7Z4L9 355 aa20.24■□□□□ 0.83
LIMS2-208ENST00000410011 PI4K2BQ8TCG2 481 aa20.24■□□□□ 0.83
LIMS2-208ENST00000410011 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
LIMS2-208ENST00000410011 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
LIMS2-208ENST00000410011 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
LIMS2-208ENST00000410011 RHPN1Q8TCX5 695 aa20.24■□□□□ 0.83
LIMS2-208ENST00000410011 EIF4A1P60842 406 aaKnown RBP20.23■□□□□ 0.83
LIMS2-208ENST00000410011 IP6K1Q92551 441 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms