RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 USP4Q13107 963 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 RBM47A0AV96 593 aaKnown RBP7.7□□□□□ -1.18
LSM5-205ENST00000409952 UNCXA6NJT0 531 aa7.7□□□□□ -1.18
LSM5-205ENST00000409952 H3BM21 787 aa7.7□□□□□ -1.18
LSM5-205ENST00000409952 LZTS3O60299 673 aaPredicted RBP7.7□□□□□ -1.18
LSM5-205ENST00000409952 LMOD1P29536 600 aaPredicted RBP7.7□□□□□ -1.18
LSM5-205ENST00000409952 MYCP01106 439 aaPredicted RBP7.69□□□□□ -1.18
LSM5-205ENST00000409952 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
LSM5-205ENST00000409952 ERBB4Q15303 1308 aa7.69□□□□□ -1.18
LSM5-205ENST00000409952 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 IL2RAP01589 272 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 CDK11BP21127 795 aaKnown RBP7.68□□□□□ -1.18
LSM5-205ENST00000409952 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
LSM5-205ENST00000409952 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
LSM5-205ENST00000409952 IGSF5Q9NSI5 407 aa7.68□□□□□ -1.18
LSM5-205ENST00000409952 CDK11AQ9UQ88 783 aaPredicted RBP7.68□□□□□ -1.18
LSM5-205ENST00000409952 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 FIGNL2A6NMB9 653 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 WASLO00401 505 aaPredicted RBP7.67□□□□□ -1.18
LSM5-205ENST00000409952 VSIG8P0DPA2 414 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 PTSQ03393 145 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 ARHGEF10LQ9HCE6 1279 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 PCDHGA11Q9Y5H2 935 aa7.67□□□□□ -1.18
LSM5-205ENST00000409952 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
LSM5-205ENST00000409952 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
LSM5-205ENST00000409952 SKIP12755 728 aa7.66□□□□□ -1.18
LSM5-205ENST00000409952 SCNN1DP51172 638 aa7.66□□□□□ -1.18
LSM5-205ENST00000409952 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
LSM5-205ENST00000409952 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
LSM5-205ENST00000409952 TFIP11Q9UBB9 837 aaKnown RBP7.66□□□□□ -1.18
LSM5-205ENST00000409952 USP17L5A8MUK1 530 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 GMPRP36959 345 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 LYSMD3Q7Z3D4 306 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
LSM5-205ENST00000409952 MEN1O00255 615 aa7.64□□□□□ -1.19
LSM5-205ENST00000409952 ATP9BO43861 1147 aa7.64□□□□□ -1.19
LSM5-205ENST00000409952 ERCC3P19447 782 aa7.64□□□□□ -1.19
LSM5-205ENST00000409952 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
LSM5-205ENST00000409952 WDR44Q5JSH3 913 aa7.64□□□□□ -1.19
LSM5-205ENST00000409952 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
LSM5-205ENST00000409952 MAFBQ9Y5Q3 323 aaPredicted RBP7.64□□□□□ -1.19
LSM5-205ENST00000409952 CENPCQ03188 943 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 NCOA4Q13772 614 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 EML3Q32P44 896 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 ESCO1Q5FWF5 840 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 CCDC155Q8N6L0 562 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 CCER1Q8TC90 406 aaPredicted RBP7.63□□□□□ -1.19
LSM5-205ENST00000409952 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 NANOS1Q8WY41 292 aaKnown RBP7.63□□□□□ -1.19
LSM5-205ENST00000409952 NLRP3Q96P20 1036 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 RAB6BQ9NRW1 208 aa7.63□□□□□ -1.19
LSM5-205ENST00000409952 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
LSM5-205ENST00000409952 STAU1O95793 577 aaKnown RBP7.62□□□□□ -1.19
LSM5-205ENST00000409952 INHAP05111 366 aa7.62□□□□□ -1.19
LSM5-205ENST00000409952 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
LSM5-205ENST00000409952 NOD1Q9Y239 953 aa7.62□□□□□ -1.19
LSM5-205ENST00000409952 USP17L3A6NCW0 530 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 USP17L4A6NCW7 530 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 TXNDC2Q86VQ3 553 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 IRF7Q92985 503 aa7.61□□□□□ -1.19
LSM5-205ENST00000409952 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
LSM5-205ENST00000409952 GDF10P55107 478 aa7.6□□□□□ -1.19
LSM5-205ENST00000409952 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
LSM5-205ENST00000409952 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
LSM5-205ENST00000409952 PRICKLE2Q7Z3G6 844 aa7.6□□□□□ -1.19
LSM5-205ENST00000409952 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
LSM5-205ENST00000409952 KIAA1522Q9P206 1035 aaPredicted RBP7.6□□□□□ -1.19
LSM5-205ENST00000409952 DKK1O94907 266 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 ITGA6P23229 1130 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 GTF2IP78347 998 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 POU4F2Q12837 409 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 MTFR1Q15390 333 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
LSM5-205ENST00000409952 DEPDC4Q8N2C3 294 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 MRRFQ96E11 262 aaKnown RBP7.59□□□□□ -1.19
LSM5-205ENST00000409952 DYRK1BQ9Y463 629 aa7.59□□□□□ -1.19
LSM5-205ENST00000409952 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
LSM5-205ENST00000409952 TRIM50Q86XT4 487 aa7.58□□□□□ -1.2
LSM5-205ENST00000409952 GPR161Q8N6U8 529 aaKnown RBP7.58□□□□□ -1.2
LSM5-205ENST00000409952 IQSEC3Q9UPP2 1182 aaPredicted RBP7.58□□□□□ -1.2
LSM5-205ENST00000409952 RHOQP17081 205 aa7.57□□□□□ -1.2
LSM5-205ENST00000409952 SMTNP53814 917 aa7.57□□□□□ -1.2
LSM5-205ENST00000409952 CLDN10P78369 228 aa7.57□□□□□ -1.2
LSM5-205ENST00000409952 KANK4Q5T7N3 995 aaPredicted RBP7.57□□□□□ -1.2
LSM5-205ENST00000409952 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
LSM5-205ENST00000409952 ZSCAN10Q96SZ4 725 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms