RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 GNG11P61952 73 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 IRX3P78415 501 aaPredicted RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 MCM6Q14566 821 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 RSPH14Q9UHP6 348 aa10.66□□□□□ -0.7
POLR1B-203ENST00000409894 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
POLR1B-203ENST00000409894 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 DDX19AQ9NUU7 478 aaKnown RBP10.65□□□□□ -0.7
POLR1B-203ENST00000409894 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 PHF23Q9BUL5 403 aaPredicted RBP10.65□□□□□ -0.7
POLR1B-203ENST00000409894 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
POLR1B-203ENST00000409894 EZRP15311 586 aaKnown RBP10.65□□□□□ -0.7
POLR1B-203ENST00000409894 MX1P20591 662 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 UVSSAQ2YD98 709 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 CTR9Q6PD62 1173 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 TBC1D9Q6ZT07 1266 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 MICALCLQ6ZW33 695 aa10.65□□□□□ -0.7
POLR1B-203ENST00000409894 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
POLR1B-203ENST00000409894 NLRP6P59044 892 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 LUZP1Q86V48 1076 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 ARFGAP3Q9NP61 516 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 SSBP05455 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
POLR1B-203ENST00000409894 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
POLR1B-203ENST00000409894 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
POLR1B-203ENST00000409894 LIMCH1Q9UPQ0 1083 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 KIF21BO75037 1637 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
POLR1B-203ENST00000409894 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 SEPT11Q9NVA2 429 aaKnown RBP10.64□□□□□ -0.71
POLR1B-203ENST00000409894 STX6O43752 255 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 SPA17Q15506 151 aa10.64□□□□□ -0.71
POLR1B-203ENST00000409894 CCDC175P0C221 793 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 LIG1P18858 919 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 MCM3P25205 808 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 TMPOP42166 694 aaKnown RBP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 FSIP1Q8NA03 581 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 SKILP12757 684 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 UBE2HP62256 183 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 CCDC12Q8WUD4 166 aaPredicted RBP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
POLR1B-203ENST00000409894 CTAGE5O15320 804 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 CDKL5O76039 1030 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 DUSP27Q5VZP5 1158 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 C10orf67Q8IYJ2 551 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
POLR1B-203ENST00000409894 HLTFQ14527 1009 aaKnown RBP eCLIP10.62□□□□□ -0.71
POLR1B-203ENST00000409894 LRPPRCP42704 1394 aaKnown RBP10.62□□□□□ -0.71
POLR1B-203ENST00000409894 ATP2C2O75185 946 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 EVA1CP58658 441 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 PSME1Q06323 249 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 BMP2KLQ5H9B9 411 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 NLRP2Q9NX02 1062 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 CAPN2P17655 700 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 ANKRD18AQ8IVF6 992 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 ISM2Q6H9L7 571 aa10.62□□□□□ -0.71
POLR1B-203ENST00000409894 BICRAQ9NZM4 1560 aa10.61□□□□□ -0.71
POLR1B-203ENST00000409894 SLC3A2P08195 630 aaKnown RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
POLR1B-203ENST00000409894 SLC26A8Q96RN1 970 aa10.61□□□□□ -0.71
POLR1B-203ENST00000409894 SRRTQ9BXP5 876 aaKnown RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 GBP2P32456 591 aaPredicted RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 SMAP1Q8IYB5 467 aaPredicted RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
POLR1B-203ENST00000409894 ZNF397Q8NF99 534 aaPredicted RBP10.61□□□□□ -0.71
POLR1B-203ENST00000409894 CCDC171Q6TFL3 1326 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 TRIM27P14373 513 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 STX1AQ16623 288 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 PIBF1Q8WXW3 757 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 NUP88Q99567 741 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 CTNNA3Q9UI47 895 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 SLU7O95391 586 aaKnown RBP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 C8orf76Q96K31 380 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 IVLP07476 585 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 GJB2P29033 226 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 MATR3P43243 847 aaKnown RBP eCLIP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 NACAP1Q9BZK3 213 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 NF2P35240 595 aa10.6□□□□□ -0.71
POLR1B-203ENST00000409894 SMC1AQ14683 1233 aaKnown RBP10.6□□□□□ -0.71
POLR1B-203ENST00000409894 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 GOLGA6L9A6NEM1 432 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 VGLL3A8MV65 326 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 PHACTR2O75167 634 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
POLR1B-203ENST00000409894 SPG7Q9UQ90 795 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms