RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
IMP4-202ENST00000409649 MYH16Q9H6N6 1097 aa21.68■■□□□ 1.06
IMP4-202ENST00000409649 DOT1LQ8TEK3 1739 aa21.67■■□□□ 1.06
IMP4-202ENST00000409649 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
IMP4-202ENST00000409649 E9PSI1 815 aa21.67■■□□□ 1.06
IMP4-202ENST00000409649 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
IMP4-202ENST00000409649 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
IMP4-202ENST00000409649 PIGBQ92521 554 aa21.67■■□□□ 1.06
IMP4-202ENST00000409649 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
IMP4-202ENST00000409649 CHL1O00533 1208 aa21.66■■□□□ 1.06
IMP4-202ENST00000409649 CCDC125Q86Z20 511 aa21.66■■□□□ 1.06
IMP4-202ENST00000409649 TSPYL4Q9UJ04 414 aa21.66■■□□□ 1.06
IMP4-202ENST00000409649 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
IMP4-202ENST00000409649 KCNQ2O43526 872 aa21.65■■□□□ 1.06
IMP4-202ENST00000409649 ZNF853P0CG23 659 aa21.65■■□□□ 1.06
IMP4-202ENST00000409649 LAS1LQ9Y4W2 734 aaKnown RBP21.65■■□□□ 1.06
IMP4-202ENST00000409649 TRIM37O94972 964 aa21.64■■□□□ 1.05
IMP4-202ENST00000409649 SF3B2Q13435 895 aaKnown RBP21.64■■□□□ 1.05
IMP4-202ENST00000409649 ZNF790Q6PG37 636 aa21.64■■□□□ 1.05
IMP4-202ENST00000409649 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.05
IMP4-202ENST00000409649 ATG3Q9NT62 314 aa21.61■■□□□ 1.05
IMP4-202ENST00000409649 VIRMAQ69YN4 1812 aaKnown RBP21.61■■□□□ 1.05
IMP4-202ENST00000409649 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
IMP4-202ENST00000409649 ITGB4P16144 1822 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 SBF2Q86WG5 1849 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 FMNL2Q96PY5 1086 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 CHMP4AQ9BY43 222 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 MBIPQ9NS73 344 aa21.6■■□□□ 1.05
IMP4-202ENST00000409649 ASAP1Q9ULH1 1129 aa21.59■■□□□ 1.05
IMP4-202ENST00000409649 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
IMP4-202ENST00000409649 KAT6BQ8WYB5 2073 aa21.59■■□□□ 1.05
IMP4-202ENST00000409649 SOS1Q07889 1333 aaPredicted RBP21.58■■□□□ 1.05
IMP4-202ENST00000409649 PLSCR1O15162 318 aa21.58■■□□□ 1.05
IMP4-202ENST00000409649 VSIG10Q8N0Z9 540 aa21.58■■□□□ 1.05
IMP4-202ENST00000409649 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
IMP4-202ENST00000409649 APBA3O96018 575 aa21.57■■□□□ 1.04
IMP4-202ENST00000409649 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
IMP4-202ENST00000409649 FANCIQ9NVI1 1328 aa21.56■■□□□ 1.04
IMP4-202ENST00000409649 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
IMP4-202ENST00000409649 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
IMP4-202ENST00000409649 TEX13AQ9BXU3 409 aaPredicted RBP21.56■■□□□ 1.04
IMP4-202ENST00000409649 HOXB7P09629 217 aa21.55■■□□□ 1.04
IMP4-202ENST00000409649 BAG6P46379 1132 aa21.55■■□□□ 1.04
IMP4-202ENST00000409649 BTAF1O14981 1849 aa21.55■■□□□ 1.04
IMP4-202ENST00000409649 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
IMP4-202ENST00000409649 PTCD1O75127 700 aaKnown RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 SNRPA1P09661 255 aaKnown RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 SLC27A3Q5K4L6 730 aa21.54■■□□□ 1.04
IMP4-202ENST00000409649 PTF1AQ7RTS3 328 aa21.54■■□□□ 1.04
IMP4-202ENST00000409649 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
IMP4-202ENST00000409649 ZNF496Q96IT1 587 aaPredicted RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 SPINK5Q9NQ38 1064 aaPredicted RBP21.54■■□□□ 1.04
IMP4-202ENST00000409649 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
IMP4-202ENST00000409649 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
IMP4-202ENST00000409649 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
IMP4-202ENST00000409649 CT47B1P0C2W7 299 aaPredicted RBP21.53■■□□□ 1.04
IMP4-202ENST00000409649 SIK1P57059 783 aa21.53■■□□□ 1.04
IMP4-202ENST00000409649 KCNQ3O43525 872 aa21.52■■□□□ 1.04
IMP4-202ENST00000409649 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.04
IMP4-202ENST00000409649 KCPQ6ZWJ8 1503 aa21.51■■□□□ 1.03
IMP4-202ENST00000409649 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
IMP4-202ENST00000409649 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
IMP4-202ENST00000409649 CCNL1Q9UK58 526 aaPredicted RBP21.5■■□□□ 1.03
IMP4-202ENST00000409649 UBR2Q8IWV8 1755 aa21.49■■□□□ 1.03
IMP4-202ENST00000409649 STARD3NLO95772 234 aa21.49■■□□□ 1.03
IMP4-202ENST00000409649 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
IMP4-202ENST00000409649 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
IMP4-202ENST00000409649 TNS1Q9HBL0 1735 aaKnown RBP21.49■■□□□ 1.03
IMP4-202ENST00000409649 ZNF831Q5JPB2 1677 aa21.48■■□□□ 1.03
IMP4-202ENST00000409649 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
IMP4-202ENST00000409649 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
IMP4-202ENST00000409649 RGPD3A6NKT7 1758 aaPredicted RBP21.48■■□□□ 1.03
IMP4-202ENST00000409649 RGPD4Q7Z3J3 1758 aa21.48■■□□□ 1.03
IMP4-202ENST00000409649 TXNRD1Q16881 649 aa21.47■■□□□ 1.03
IMP4-202ENST00000409649 UPF1Q92900 1129 aaKnown RBP eCLIP21.47■■□□□ 1.03
IMP4-202ENST00000409649 C8orf58Q8NAV2 365 aa21.46■■□□□ 1.03
IMP4-202ENST00000409649 CAMKK2Q96RR4 588 aa21.45■■□□□ 1.02
IMP4-202ENST00000409649 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
IMP4-202ENST00000409649 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
IMP4-202ENST00000409649 LY75O60449 1722 aa21.44■■□□□ 1.02
IMP4-202ENST00000409649 EN1Q05925 392 aaPredicted RBP21.43■■□□□ 1.02
IMP4-202ENST00000409649 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
IMP4-202ENST00000409649 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
IMP4-202ENST00000409649 DNAJC10Q8IXB1 793 aa21.43■■□□□ 1.02
IMP4-202ENST00000409649 SLC4A9Q96Q91 983 aa21.43■■□□□ 1.02
IMP4-202ENST00000409649 EP400Q96L91 3159 aa21.42■■□□□ 1.02
IMP4-202ENST00000409649 ELL2O00472 640 aaPredicted RBP21.42■■□□□ 1.02
IMP4-202ENST00000409649 VAMP4O75379 141 aa21.42■■□□□ 1.02
IMP4-202ENST00000409649 KRT24Q2M2I5 525 aa21.42■■□□□ 1.02
IMP4-202ENST00000409649 RC3H1Q5TC82 1133 aaKnown RBP21.42■■□□□ 1.02
IMP4-202ENST00000409649 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
IMP4-202ENST00000409649 TSPYL6Q8N831 410 aa21.41■■□□□ 1.02
IMP4-202ENST00000409649 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
IMP4-202ENST00000409649 CNTNAP4Q9C0A0 1308 aa21.4■■□□□ 1.02
IMP4-202ENST00000409649 ITPK1Q13572 414 aa21.4■■□□□ 1.02
IMP4-202ENST00000409649 PROM2Q8N271 834 aa21.4■■□□□ 1.02
IMP4-202ENST00000409649 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms