RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
PMS1-203ENST00000409593 CCDC97Q96F63 343 aaPredicted RBP8.38□□□□□ -1.07
PMS1-203ENST00000409593 RASA1P20936 1047 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
PMS1-203ENST00000409593 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
PMS1-203ENST00000409593 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
PMS1-203ENST00000409593 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 WFS1O76024 890 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
PMS1-203ENST00000409593 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 TAS1R3Q7RTX0 852 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 ZNF358Q9NW07 568 aa8.37□□□□□ -1.07
PMS1-203ENST00000409593 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
PMS1-203ENST00000409593 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
PMS1-203ENST00000409593 PHKA2P46019 1235 aa8.36□□□□□ -1.07
PMS1-203ENST00000409593 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
PMS1-203ENST00000409593 NPAS3Q8IXF0 933 aa8.36□□□□□ -1.07
PMS1-203ENST00000409593 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
PMS1-203ENST00000409593 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 H3BM21 787 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 BACH1O14867 736 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 SMTNP53814 917 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 LARP1Q6PKG0 1096 aaKnown RBP8.35□□□□□ -1.07
PMS1-203ENST00000409593 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
PMS1-203ENST00000409593 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
PMS1-203ENST00000409593 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.07
PMS1-203ENST00000409593 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
PMS1-203ENST00000409593 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.07
PMS1-203ENST00000409593 A6NJY4 79 aa8.34□□□□□ -1.08
PMS1-203ENST00000409593 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.08
PMS1-203ENST00000409593 KANK4Q5T7N3 995 aaPredicted RBP8.34□□□□□ -1.08
PMS1-203ENST00000409593 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.08
PMS1-203ENST00000409593 GAS2L1Q99501 681 aaPredicted RBP8.34□□□□□ -1.08
PMS1-203ENST00000409593 TIMMDC1Q9NPL8 285 aa8.34□□□□□ -1.08
PMS1-203ENST00000409593 CDC14CA4D256 554 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L15C9J2P7 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L10C9JJH3 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L13C9JLJ4 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L12C9JPN9 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L11C9JVI0 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L21D6R901 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L18D6R9N7 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L22D6RA61 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L17D6RBQ6 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L19D6RCP7 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L20D6RJB6 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 USP17L24Q0WX57 530 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
PMS1-203ENST00000409593 SIX5Q8N196 739 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
PMS1-203ENST00000409593 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 ITGA6P23229 1130 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 PLA2G4AP47712 749 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 IRF7Q92985 503 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
PMS1-203ENST00000409593 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
PMS1-203ENST00000409593 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 PTK7Q13308 1070 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 MTFR1Q15390 333 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 TNS4Q8IZW8 715 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 GPAMQ9HCL2 828 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
PMS1-203ENST00000409593 DPYDQ12882 1025 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 TSEN2Q8NCE0 465 aaKnown RBP8.3□□□□□ -1.08
PMS1-203ENST00000409593 NIFKQ9BYG3 293 aaKnown RBP8.3□□□□□ -1.08
PMS1-203ENST00000409593 C1orf115Q9H7X2 142 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
PMS1-203ENST00000409593 SEC13P55735 322 aa8.29□□□□□ -1.08
PMS1-203ENST00000409593 TBCELQ5QJ74 424 aa8.29□□□□□ -1.08
PMS1-203ENST00000409593 SCHIP1Q9P0W5 487 aaPredicted RBP8.29□□□□□ -1.08
PMS1-203ENST00000409593 A0A1B0GTH6 734 aa8.28□□□□□ -1.08
PMS1-203ENST00000409593 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
PMS1-203ENST00000409593 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
PMS1-203ENST00000409593 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
PMS1-203ENST00000409593 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
PMS1-203ENST00000409593 AIDAQ96BJ3 306 aa8.28□□□□□ -1.08
PMS1-203ENST00000409593 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
PMS1-203ENST00000409593 CDK2AP1O14519 115 aa8.27□□□□□ -1.08
PMS1-203ENST00000409593 DKK1O94907 266 aa8.27□□□□□ -1.08
PMS1-203ENST00000409593 EPHA4P54764 986 aa8.27□□□□□ -1.08
PMS1-203ENST00000409593 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.08
PMS1-203ENST00000409593 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.08
PMS1-203ENST00000409593 LGR5O75473 907 aa8.27□□□□□ -1.09
PMS1-203ENST00000409593 F11P03951 625 aa8.27□□□□□ -1.09
PMS1-203ENST00000409593 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
PMS1-203ENST00000409593 HINFPQ9BQA5 517 aa8.27□□□□□ -1.09
PMS1-203ENST00000409593 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
PMS1-203ENST00000409593 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms