RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 KCNQ4P56696 695 aa19.67■□□□□ 0.74
NIF3L1-205ENST00000409588 SULT6B1Q6IMI4 303 aa19.67■□□□□ 0.74
NIF3L1-205ENST00000409588 QSER1Q2KHR3 1735 aa19.66■□□□□ 0.74
NIF3L1-205ENST00000409588 C1orf141Q5JVX7 400 aa19.66■□□□□ 0.74
NIF3L1-205ENST00000409588 CC2D1BQ5T0F9 858 aaKnown RBP19.66■□□□□ 0.74
NIF3L1-205ENST00000409588 DIAPH1O60610 1272 aaKnown RBP19.65■□□□□ 0.74
NIF3L1-205ENST00000409588 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
NIF3L1-205ENST00000409588 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
NIF3L1-205ENST00000409588 LOC102724428A0A0B4J2F2 783 aa19.64■□□□□ 0.73
NIF3L1-205ENST00000409588 SIK1P57059 783 aa19.64■□□□□ 0.73
NIF3L1-205ENST00000409588 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
NIF3L1-205ENST00000409588 SYT17Q9BSW7 474 aa19.64■□□□□ 0.73
NIF3L1-205ENST00000409588 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
NIF3L1-205ENST00000409588 ITGB4P16144 1822 aa19.62■□□□□ 0.73
NIF3L1-205ENST00000409588 CABP4P57796 275 aa19.62■□□□□ 0.73
NIF3L1-205ENST00000409588 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
NIF3L1-205ENST00000409588 ATG3Q9NT62 314 aa19.62■□□□□ 0.73
NIF3L1-205ENST00000409588 COL23A1Q86Y22 540 aaPredicted RBP19.61■□□□□ 0.73
NIF3L1-205ENST00000409588 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
NIF3L1-205ENST00000409588 AK7Q96M32 723 aa19.61■□□□□ 0.73
NIF3L1-205ENST00000409588 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
NIF3L1-205ENST00000409588 ATP6V1AP38606 617 aa19.6■□□□□ 0.73
NIF3L1-205ENST00000409588 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
NIF3L1-205ENST00000409588 SSFA2P28290 1259 aa19.59■□□□□ 0.73
NIF3L1-205ENST00000409588 TOGARAM1Q9Y4F4 1720 aa19.59■□□□□ 0.73
NIF3L1-205ENST00000409588 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
NIF3L1-205ENST00000409588 C5P01031 1676 aa19.56■□□□□ 0.72
NIF3L1-205ENST00000409588 RC3H1Q5TC82 1133 aaKnown RBP19.56■□□□□ 0.72
NIF3L1-205ENST00000409588 NFATC2IPQ8NCF5 419 aa19.56■□□□□ 0.72
NIF3L1-205ENST00000409588 COL24A1Q17RW2 1714 aa19.55■□□□□ 0.72
NIF3L1-205ENST00000409588 TAF1LQ8IZX4 1826 aa19.54■□□□□ 0.72
NIF3L1-205ENST00000409588 LINC00116Q8NCU8 138 aa19.54■□□□□ 0.72
NIF3L1-205ENST00000409588 NUDCQ9Y266 331 aa19.54■□□□□ 0.72
NIF3L1-205ENST00000409588 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
NIF3L1-205ENST00000409588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.53■□□□□ 0.72
NIF3L1-205ENST00000409588 HMOX1P09601 288 aa19.53■□□□□ 0.72
NIF3L1-205ENST00000409588 C4BP0C0L5 1744 aa19.53■□□□□ 0.72
NIF3L1-205ENST00000409588 ITPK1Q13572 414 aa19.52■□□□□ 0.72
NIF3L1-205ENST00000409588 RTCBQ9Y3I0 505 aaKnown RBP19.52■□□□□ 0.72
NIF3L1-205ENST00000409588 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.71
NIF3L1-205ENST00000409588 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
NIF3L1-205ENST00000409588 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
NIF3L1-205ENST00000409588 CD2APQ9Y5K6 639 aa19.51■□□□□ 0.71
NIF3L1-205ENST00000409588 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
NIF3L1-205ENST00000409588 GNPATO15228 680 aa19.5■□□□□ 0.71
NIF3L1-205ENST00000409588 YY1P25490 414 aa19.5■□□□□ 0.71
NIF3L1-205ENST00000409588 MTHFSDQ2M296 383 aaKnown RBP19.5■□□□□ 0.71
NIF3L1-205ENST00000409588 GAS2L2Q8NHY3 880 aa19.5■□□□□ 0.71
NIF3L1-205ENST00000409588 TUBGCP6Q96RT7 1819 aa19.49■□□□□ 0.71
NIF3L1-205ENST00000409588 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
NIF3L1-205ENST00000409588 CNTNAP4Q9C0A0 1308 aa19.49■□□□□ 0.71
NIF3L1-205ENST00000409588 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
NIF3L1-205ENST00000409588 NLGN1Q8N2Q7 840 aa19.48■□□□□ 0.71
NIF3L1-205ENST00000409588 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
NIF3L1-205ENST00000409588 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
NIF3L1-205ENST00000409588 PHF14O94880 888 aa19.47■□□□□ 0.71
NIF3L1-205ENST00000409588 PPP2R1AP30153 589 aa19.47■□□□□ 0.71
NIF3L1-205ENST00000409588 CNGB1Q14028 1251 aaPredicted RBP19.47■□□□□ 0.71
NIF3L1-205ENST00000409588 GPR162Q16538 588 aa19.47■□□□□ 0.71
NIF3L1-205ENST00000409588 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
NIF3L1-205ENST00000409588 FCHSD2O94868 740 aa19.46■□□□□ 0.71
NIF3L1-205ENST00000409588 VSIG10Q8N0Z9 540 aa19.46■□□□□ 0.71
NIF3L1-205ENST00000409588 KLHL34Q8N239 644 aa19.46■□□□□ 0.71
NIF3L1-205ENST00000409588 COL3A1P02461 1466 aaPredicted RBP19.46■□□□□ 0.71
NIF3L1-205ENST00000409588 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
NIF3L1-205ENST00000409588 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
NIF3L1-205ENST00000409588 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
NIF3L1-205ENST00000409588 GRIN3BO60391 1043 aa19.44■□□□□ 0.7
NIF3L1-205ENST00000409588 RFC4P35249 363 aa19.44■□□□□ 0.7
NIF3L1-205ENST00000409588 AMIGO3Q86WK7 504 aa19.44■□□□□ 0.7
NIF3L1-205ENST00000409588 SCN11AQ9UI33 1791 aa19.44■□□□□ 0.7
NIF3L1-205ENST00000409588 ARHGEF1Q92888 912 aaKnown RBP19.43■□□□□ 0.7
NIF3L1-205ENST00000409588 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 TEFQ10587 303 aa19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 TEX13AQ9BXU3 409 aaPredicted RBP19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 MRC1P22897 1456 aa19.41■□□□□ 0.7
NIF3L1-205ENST00000409588 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
NIF3L1-205ENST00000409588 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
NIF3L1-205ENST00000409588 TTC5Q8N0Z6 440 aa19.4■□□□□ 0.7
NIF3L1-205ENST00000409588 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
NIF3L1-205ENST00000409588 PRKAR2BP31323 418 aa19.39■□□□□ 0.69
NIF3L1-205ENST00000409588 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
NIF3L1-205ENST00000409588 NLGN2Q8NFZ4 835 aa19.39■□□□□ 0.69
NIF3L1-205ENST00000409588 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
NIF3L1-205ENST00000409588 NEFMP07197 916 aa19.38■□□□□ 0.69
NIF3L1-205ENST00000409588 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 STARD3NLO95772 234 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 MMP10P09238 476 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 RALBP1Q15311 655 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 INTS5Q6P9B9 1019 aaKnown RBP19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 CCDC87Q9NVE4 849 aa19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 COL5A3P25940 1745 aaPredicted RBP19.37■□□□□ 0.69
NIF3L1-205ENST00000409588 CICQ96RK0 1608 aaPredicted RBP19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 CYP19A1P11511 503 aaPredicted RBP19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 GYS1P13807 737 aa19.36■□□□□ 0.69
NIF3L1-205ENST00000409588 TGFB2P61812 414 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms