RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SYT17Q9BSW7 474 aa26.46■■□□□ 1.83
TSPAN4-209ENST00000409543 DCAF8L1A6NGE4 600 aa26.45■■□□□ 1.82
TSPAN4-209ENST00000409543 ATP6V1AP38606 617 aa26.45■■□□□ 1.82
TSPAN4-209ENST00000409543 AKAP4Q5JQC9 854 aa26.45■■□□□ 1.82
TSPAN4-209ENST00000409543 ITPK1Q13572 414 aa26.44■■□□□ 1.82
TSPAN4-209ENST00000409543 LINC00116Q8NCU8 138 aa26.44■■□□□ 1.82
TSPAN4-209ENST00000409543 MAP3K5Q99683 1374 aa26.43■■□□□ 1.82
TSPAN4-209ENST00000409543 NFATC2IPQ8NCF5 419 aa26.41■■□□□ 1.82
TSPAN4-209ENST00000409543 ZNF831Q5JPB2 1677 aa26.41■■□□□ 1.82
TSPAN4-209ENST00000409543 SCN11AQ9UI33 1791 aa26.41■■□□□ 1.82
TSPAN4-209ENST00000409543 U2SURPO15042 1029 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-209ENST00000409543 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
TSPAN4-209ENST00000409543 RBM42Q9BTD8 480 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-209ENST00000409543 UBR3Q6ZT12 1888 aa26.4■■□□□ 1.82
TSPAN4-209ENST00000409543 MTHFSDQ2M296 383 aaKnown RBP26.39■■□□□ 1.82
TSPAN4-209ENST00000409543 AMIGO3Q86WK7 504 aa26.39■■□□□ 1.82
TSPAN4-209ENST00000409543 SLC4A9Q96Q91 983 aa26.39■■□□□ 1.82
TSPAN4-209ENST00000409543 SSFA2P28290 1259 aa26.38■■□□□ 1.81
TSPAN4-209ENST00000409543 PPP2R1AP30153 589 aa26.38■■□□□ 1.81
TSPAN4-209ENST00000409543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.37■■□□□ 1.81
TSPAN4-209ENST00000409543 GNPATO15228 680 aa26.36■■□□□ 1.81
TSPAN4-209ENST00000409543 PHF14O94880 888 aa26.36■■□□□ 1.81
TSPAN4-209ENST00000409543 LGR6Q9HBX8 967 aa26.36■■□□□ 1.81
TSPAN4-209ENST00000409543 RNMTO43148 476 aaKnown RBP26.35■■□□□ 1.81
TSPAN4-209ENST00000409543 MSL1Q68DK7 614 aa26.35■■□□□ 1.81
TSPAN4-209ENST00000409543 SMIM5Q71RC9 77 aa26.35■■□□□ 1.81
TSPAN4-209ENST00000409543 SLC52A2Q9HAB3 445 aa26.35■■□□□ 1.81
TSPAN4-209ENST00000409543 PTCD1O75127 700 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-209ENST00000409543 RC3H1Q5TC82 1133 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-209ENST00000409543 MRC1P22897 1456 aa26.32■■□□□ 1.8
TSPAN4-209ENST00000409543 KLHL34Q8N239 644 aa26.32■■□□□ 1.8
TSPAN4-209ENST00000409543 NUDCQ9Y266 331 aa26.32■■□□□ 1.8
TSPAN4-209ENST00000409543 ADAMTS7Q9UKP4 1686 aa26.31■■□□□ 1.8
TSPAN4-209ENST00000409543 CNTNAP4Q9C0A0 1308 aa26.31■■□□□ 1.8
TSPAN4-209ENST00000409543 COL5A3P25940 1745 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-209ENST00000409543 GAS2L2Q8NHY3 880 aa26.3■■□□□ 1.8
TSPAN4-209ENST00000409543 RTCBQ9Y3I0 505 aaKnown RBP26.3■■□□□ 1.8
TSPAN4-209ENST00000409543 VIRMAQ69YN4 1812 aaKnown RBP26.29■■□□□ 1.8
TSPAN4-209ENST00000409543 TRAPPC3LQ5T215 181 aa26.28■■□□□ 1.8
TSPAN4-209ENST00000409543 RSPH6AQ9H0K4 717 aa26.28■■□□□ 1.8
TSPAN4-209ENST00000409543 RPS6KA4O75676 772 aa26.27■■□□□ 1.8
TSPAN4-209ENST00000409543 GNAT3A8MTJ3 354 aa26.26■■□□□ 1.79
TSPAN4-209ENST00000409543 ADRA2BP18089 450 aa26.26■■□□□ 1.79
TSPAN4-209ENST00000409543 PRKAR2BP31323 418 aa26.26■■□□□ 1.79
TSPAN4-209ENST00000409543 CICQ96RK0 1608 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 U2AF1L5P0DN76 240 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 YY1P25490 414 aa26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 U2AF1Q01081 240 aaKnown RBP eCLIP26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 NLGN2Q8NFZ4 835 aa26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 PHACTR3Q96KR7 559 aa26.25■■□□□ 1.79
TSPAN4-209ENST00000409543 CD2APQ9Y5K6 639 aa26.24■■□□□ 1.79
TSPAN4-209ENST00000409543 MYH14Q7Z406 1995 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-209ENST00000409543 TJP1Q07157 1748 aa26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 FCHSD2O94868 740 aa26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 CRKLP46109 303 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 SLC39A6Q13433 755 aa26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 IL17REQ8NFR9 667 aa26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 ARHGEF1Q92888 912 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-209ENST00000409543 GPR162Q16538 588 aa26.21■■□□□ 1.79
TSPAN4-209ENST00000409543 RFC4P35249 363 aa26.2■■□□□ 1.78
TSPAN4-209ENST00000409543 KCPQ6ZWJ8 1503 aa26.19■■□□□ 1.78
TSPAN4-209ENST00000409543 TEFQ10587 303 aa26.19■■□□□ 1.78
TSPAN4-209ENST00000409543 DNAJC10Q8IXB1 793 aa26.19■■□□□ 1.78
TSPAN4-209ENST00000409543 NLGN1Q8N2Q7 840 aa26.19■■□□□ 1.78
TSPAN4-209ENST00000409543 INTS5Q6P9B9 1019 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-209ENST00000409543 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
TSPAN4-209ENST00000409543 CEMIPQ8WUJ3 1361 aa26.17■■□□□ 1.78
TSPAN4-209ENST00000409543 MMP10P09238 476 aa26.16■■□□□ 1.78
TSPAN4-209ENST00000409543 CYP19A1P11511 503 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-209ENST00000409543 TTC5Q8N0Z6 440 aa26.16■■□□□ 1.78
TSPAN4-209ENST00000409543 CCDC87Q9NVE4 849 aa26.16■■□□□ 1.78
TSPAN4-209ENST00000409543 UBR2Q8IWV8 1755 aa26.15■■□□□ 1.78
TSPAN4-209ENST00000409543 GYS1P13807 737 aa26.15■■□□□ 1.78
TSPAN4-209ENST00000409543 PELP1Q8IZL8 1130 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-209ENST00000409543 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.78
TSPAN4-209ENST00000409543 SIPA1L3O60292 1781 aaPredicted RBP26.14■■□□□ 1.78
TSPAN4-209ENST00000409543 C4AP0C0L4 1744 aa26.14■■□□□ 1.77
TSPAN4-209ENST00000409543 RALBP1Q15311 655 aa26.13■■□□□ 1.77
TSPAN4-209ENST00000409543 ZNF790Q6PG37 636 aa26.13■■□□□ 1.77
TSPAN4-209ENST00000409543 CHD4Q14839 1912 aa26.12■■□□□ 1.77
TSPAN4-209ENST00000409543 UTRNP46939 3433 aa26.11■■□□□ 1.77
TSPAN4-209ENST00000409543 RTF1Q92541 710 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-209ENST00000409543 ZNF496Q96IT1 587 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-209ENST00000409543 SOS1Q07889 1333 aaPredicted RBP26.11■■□□□ 1.77
TSPAN4-209ENST00000409543 USP42Q9H9J4 1324 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-209ENST00000409543 HTATSF1O43719 755 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-209ENST00000409543 GRIN3BO60391 1043 aa26.09■■□□□ 1.77
TSPAN4-209ENST00000409543 YBX3P16989 372 aaKnown RBP eCLIP26.09■■□□□ 1.77
TSPAN4-209ENST00000409543 SRP68Q9UHB9 627 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-209ENST00000409543 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.77
TSPAN4-209ENST00000409543 STARD3NLO95772 234 aa26.08■■□□□ 1.77
TSPAN4-209ENST00000409543 BTBD11A6QL63 1104 aa26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 NEFMP07197 916 aa26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 MCM10Q7L590 875 aa26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 TEX13AQ9BXU3 409 aaPredicted RBP26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 ZBTB1Q9Y2K1 713 aa26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 PARP3Q9Y6F1 533 aa26.07■■□□□ 1.76
TSPAN4-209ENST00000409543 FMNL2Q96PY5 1086 aa26.06■■□□□ 1.76
TSPAN4-209ENST00000409543 GOLGB1Q14789 3259 aaKnown RBP26.06■■□□□ 1.76
TSPAN4-209ENST00000409543 ZPR1O75312 459 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms