RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 ANXA1P04083 346 aa12.52□□□□□ -0.4
CUL1-202ENST00000409469 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.41
CUL1-202ENST00000409469 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.41
CUL1-202ENST00000409469 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
CUL1-202ENST00000409469 SLIT3O75094 1523 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 ANKRD45Q5TZF3 282 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 ERBB3P21860 1342 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 NBR1Q14596 966 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
CUL1-202ENST00000409469 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
CUL1-202ENST00000409469 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
CUL1-202ENST00000409469 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CUL1-202ENST00000409469 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
CUL1-202ENST00000409469 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
CUL1-202ENST00000409469 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
CUL1-202ENST00000409469 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
CUL1-202ENST00000409469 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
CUL1-202ENST00000409469 TEFQ10587 303 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 FLIIQ13045 1269 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 PLEKHO1Q53GL0 409 aaPredicted RBP12.48□□□□□ -0.41
CUL1-202ENST00000409469 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
CUL1-202ENST00000409469 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 NUCB1Q02818 461 aa12.48□□□□□ -0.41
CUL1-202ENST00000409469 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
CUL1-202ENST00000409469 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
CUL1-202ENST00000409469 PTPRCP08575 1304 aa12.47□□□□□ -0.41
CUL1-202ENST00000409469 SLC39A6Q13433 755 aa12.46□□□□□ -0.41
CUL1-202ENST00000409469 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.41
CUL1-202ENST00000409469 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
CUL1-202ENST00000409469 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
CUL1-202ENST00000409469 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
CUL1-202ENST00000409469 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.42
CUL1-202ENST00000409469 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.42
CUL1-202ENST00000409469 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.42
CUL1-202ENST00000409469 SLAIN2Q9P270 581 aa12.46□□□□□ -0.42
CUL1-202ENST00000409469 SPATA31A3Q5VYP0 1347 aa12.46□□□□□ -0.42
CUL1-202ENST00000409469 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
CUL1-202ENST00000409469 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
CUL1-202ENST00000409469 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
CUL1-202ENST00000409469 CEP85Q6P2H3 762 aa12.45□□□□□ -0.42
CUL1-202ENST00000409469 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
CUL1-202ENST00000409469 PHRF1Q9P1Y6 1649 aaKnown RBP12.45□□□□□ -0.42
CUL1-202ENST00000409469 RBM10P98175 930 aaKnown RBP12.44□□□□□ -0.42
CUL1-202ENST00000409469 DCCP43146 1447 aa12.44□□□□□ -0.42
CUL1-202ENST00000409469 MEGF6O75095 1541 aa12.44□□□□□ -0.42
CUL1-202ENST00000409469 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
CUL1-202ENST00000409469 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
CUL1-202ENST00000409469 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
CUL1-202ENST00000409469 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
CUL1-202ENST00000409469 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
CUL1-202ENST00000409469 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
CUL1-202ENST00000409469 VIRMAQ69YN4 1812 aaKnown RBP12.42□□□□□ -0.42
CUL1-202ENST00000409469 ANKRD44Q8N8A2 993 aa12.42□□□□□ -0.42
CUL1-202ENST00000409469 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
CUL1-202ENST00000409469 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
CUL1-202ENST00000409469 CHMP4BQ9H444 224 aaKnown RBP12.41□□□□□ -0.42
CUL1-202ENST00000409469 STRN4Q9NRL3 753 aa12.41□□□□□ -0.42
CUL1-202ENST00000409469 EXOC6BQ9Y2D4 811 aa12.41□□□□□ -0.42
CUL1-202ENST00000409469 NCAPD2Q15021 1401 aa12.41□□□□□ -0.42
CUL1-202ENST00000409469 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
CUL1-202ENST00000409469 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 CYP27B1O15528 508 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
CUL1-202ENST00000409469 LRRFIP2Q9Y608 721 aaKnown RBP12.4□□□□□ -0.42
CUL1-202ENST00000409469 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.43
CUL1-202ENST00000409469 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.43
CUL1-202ENST00000409469 AIMP1Q12904 312 aaKnown RBP12.4□□□□□ -0.43
CUL1-202ENST00000409469 DCTPP1Q9H773 170 aa12.4□□□□□ -0.43
CUL1-202ENST00000409469 PHKG2P15735 406 aa12.39□□□□□ -0.43
CUL1-202ENST00000409469 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
CUL1-202ENST00000409469 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
CUL1-202ENST00000409469 NCOA3Q9Y6Q9 1424 aa12.39□□□□□ -0.43
CUL1-202ENST00000409469 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
CUL1-202ENST00000409469 NAP1L5Q96NT1 182 aaPredicted RBP12.39□□□□□ -0.43
CUL1-202ENST00000409469 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
CUL1-202ENST00000409469 COL18A1P39060 1754 aa12.39□□□□□ -0.43
CUL1-202ENST00000409469 GSPT1P15170 499 aaKnown RBP12.38□□□□□ -0.43
CUL1-202ENST00000409469 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
CUL1-202ENST00000409469 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
CUL1-202ENST00000409469 BRPF3Q9ULD4 1205 aa12.38□□□□□ -0.43
CUL1-202ENST00000409469 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
CUL1-202ENST00000409469 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
CUL1-202ENST00000409469 GNAI2P04899 355 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 MYL6BP14649 208 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
CUL1-202ENST00000409469 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 CAMTA1Q9Y6Y1 1673 aa12.37□□□□□ -0.43
CUL1-202ENST00000409469 TBC1D32Q96NH3 1257 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms