RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 NUP188Q5SRE5 1749 aa11.62□□□□□ -0.55
VWA3B-201ENST00000409460 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
VWA3B-201ENST00000409460 PHKG2P15735 406 aa11.62□□□□□ -0.55
VWA3B-201ENST00000409460 U2SURPO15042 1029 aaKnown RBP11.61□□□□□ -0.55
VWA3B-201ENST00000409460 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
VWA3B-201ENST00000409460 PNNQ9H307 717 aaKnown RBP11.61□□□□□ -0.55
VWA3B-201ENST00000409460 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
VWA3B-201ENST00000409460 STARD3NLO95772 234 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 LRRC4BQ9NT99 713 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 FCHSD2O94868 740 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
VWA3B-201ENST00000409460 FBLN1P23142 703 aa11.61□□□□□ -0.55
VWA3B-201ENST00000409460 KCNQ4P56696 695 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 SULT6B1Q6IMI4 303 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 PIGBQ92521 554 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 EIF4A2Q14240 407 aaKnown RBP11.6□□□□□ -0.55
VWA3B-201ENST00000409460 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
VWA3B-201ENST00000409460 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
VWA3B-201ENST00000409460 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
VWA3B-201ENST00000409460 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 TGFB2P61812 414 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 COL18A1P39060 1754 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 CYP27B1O15528 508 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 MEGF6O75095 1541 aa11.59□□□□□ -0.55
VWA3B-201ENST00000409460 PTCD1O75127 700 aaKnown RBP11.58□□□□□ -0.55
VWA3B-201ENST00000409460 MMP10P09238 476 aa11.58□□□□□ -0.55
VWA3B-201ENST00000409460 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
VWA3B-201ENST00000409460 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
VWA3B-201ENST00000409460 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
VWA3B-201ENST00000409460 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
VWA3B-201ENST00000409460 PDGFDQ9GZP0 370 aaPredicted RBP11.57□□□□□ -0.56
VWA3B-201ENST00000409460 LTN1O94822 1766 aa11.57□□□□□ -0.56
VWA3B-201ENST00000409460 ERICH6BQ5W0A0 696 aa11.57□□□□□ -0.56
VWA3B-201ENST00000409460 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
VWA3B-201ENST00000409460 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
VWA3B-201ENST00000409460 DALRD3Q5D0E6 543 aaKnown RBP11.56□□□□□ -0.56
VWA3B-201ENST00000409460 PEAK1Q9H792 1746 aa11.56□□□□□ -0.56
VWA3B-201ENST00000409460 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
VWA3B-201ENST00000409460 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
VWA3B-201ENST00000409460 ZNF652Q9Y2D9 606 aa11.55□□□□□ -0.56
VWA3B-201ENST00000409460 CNTNAP4Q9C0A0 1308 aa11.55□□□□□ -0.56
VWA3B-201ENST00000409460 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
VWA3B-201ENST00000409460 CARD14Q9BXL6 1004 aa11.55□□□□□ -0.56
VWA3B-201ENST00000409460 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
VWA3B-201ENST00000409460 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
VWA3B-201ENST00000409460 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
VWA3B-201ENST00000409460 WNK3Q9BYP7 1800 aa11.53□□□□□ -0.56
VWA3B-201ENST00000409460 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
VWA3B-201ENST00000409460 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
VWA3B-201ENST00000409460 BTAF1O14981 1849 aa11.53□□□□□ -0.56
VWA3B-201ENST00000409460 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 H0YIN7 160 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 ST5P78524 1137 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 RGPD5Q99666 1765 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
VWA3B-201ENST00000409460 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
VWA3B-201ENST00000409460 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
VWA3B-201ENST00000409460 SBF2Q86WG5 1849 aa11.5□□□□□ -0.57
VWA3B-201ENST00000409460 HMOX1P09601 288 aa11.5□□□□□ -0.57
VWA3B-201ENST00000409460 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
VWA3B-201ENST00000409460 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
VWA3B-201ENST00000409460 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
VWA3B-201ENST00000409460 PDE6BP35913 854 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
VWA3B-201ENST00000409460 APLP1P51693 650 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
VWA3B-201ENST00000409460 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
VWA3B-201ENST00000409460 SLC52A2Q9HAB3 445 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
VWA3B-201ENST00000409460 PNISRQ8TF01 805 aaKnown RBP11.49□□□□□ -0.57
VWA3B-201ENST00000409460 MYOM1P52179 1685 aa11.49□□□□□ -0.57
VWA3B-201ENST00000409460 ZNF622Q969S3 477 aaKnown RBP eCLIP11.48□□□□□ -0.57
VWA3B-201ENST00000409460 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
VWA3B-201ENST00000409460 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
VWA3B-201ENST00000409460 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
VWA3B-201ENST00000409460 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 ITPK1Q13572 414 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 NBR1Q14596 966 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 SETDB2Q96T68 719 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 HSPA6P17066 643 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 FKBP8Q14318 412 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
VWA3B-201ENST00000409460 CASZ1Q86V15 1759 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 DPEP1P16444 411 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 C2CD5Q86YS7 1000 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
VWA3B-201ENST00000409460 LMOD3Q0VAK6 560 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms