RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 LRRC59Q96AG4 307 aaKnown RBP10.04□□□□□ -0.8
SNX13-201ENST00000409076 ZDHHC9Q9Y397 364 aa10.04□□□□□ -0.8
SNX13-201ENST00000409076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNX13-201ENST00000409076 ADCY5O95622 1261 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 IQGAP3Q86VI3 1631 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
SNX13-201ENST00000409076 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
SNX13-201ENST00000409076 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
SNX13-201ENST00000409076 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 SYAP1Q96A49 352 aaPredicted RBP10.03□□□□□ -0.8
SNX13-201ENST00000409076 CHD1O14646 1710 aa10.03□□□□□ -0.8
SNX13-201ENST00000409076 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
SNX13-201ENST00000409076 AACSQ86V21 672 aa10.02□□□□□ -0.81
SNX13-201ENST00000409076 SLC52A1Q9NWF4 448 aa10.02□□□□□ -0.81
SNX13-201ENST00000409076 TRPM2O94759 1503 aa10.02□□□□□ -0.81
SNX13-201ENST00000409076 ISM2Q6H9L7 571 aa10.02□□□□□ -0.81
SNX13-201ENST00000409076 FSD1Q9BTV5 496 aa10.02□□□□□ -0.81
SNX13-201ENST00000409076 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 CHPF2Q9P2E5 772 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 LRSAM1Q6UWE0 723 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 C16orf45Q96MC5 204 aaPredicted RBP10.01□□□□□ -0.81
SNX13-201ENST00000409076 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 YTHDC2Q9H6S0 1430 aaKnown RBP10.01□□□□□ -0.81
SNX13-201ENST00000409076 ABCC1P33527 1531 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 PRAMEF22A3QJZ6 481 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 LARGE1O95461 756 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 CHGBP05060 677 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 AK2P54819 239 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 SLC39A6Q13433 755 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 EYA1Q99502 592 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 TMX1Q9H3N1 280 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 CCDC39Q9UFE4 941 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 YEATS2Q9ULM3 1422 aa10.01□□□□□ -0.81
SNX13-201ENST00000409076 PTMSP20962 102 aa10□□□□□ -0.81
SNX13-201ENST00000409076 GJB2P29033 226 aa10□□□□□ -0.81
SNX13-201ENST00000409076 GORABQ5T7V8 394 aa10□□□□□ -0.81
SNX13-201ENST00000409076 RASEFQ8IZ41 740 aa10□□□□□ -0.81
SNX13-201ENST00000409076 RIMS2Q9UQ26 1411 aa10□□□□□ -0.81
SNX13-201ENST00000409076 KAT6BQ8WYB5 2073 aa10□□□□□ -0.81
SNX13-201ENST00000409076 UNC13BO14795 1591 aa10□□□□□ -0.81
SNX13-201ENST00000409076 CHMLP26374 656 aa10□□□□□ -0.81
SNX13-201ENST00000409076 CCDC30Q5VVM6 783 aa10□□□□□ -0.81
SNX13-201ENST00000409076 TRIM5Q9C035 493 aa10□□□□□ -0.81
SNX13-201ENST00000409076 LGR6Q9HBX8 967 aa10□□□□□ -0.81
SNX13-201ENST00000409076 H3BQV1 296 aa10□□□□□ -0.81
SNX13-201ENST00000409076 ZC3H6P61129 1189 aaKnown RBP10□□□□□ -0.81
SNX13-201ENST00000409076 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
SNX13-201ENST00000409076 IFFO2Q5TF58 517 aa10□□□□□ -0.81
SNX13-201ENST00000409076 FILIP1Q7Z7B0 1213 aa10□□□□□ -0.81
SNX13-201ENST00000409076 CEP152O94986 1710 aa10□□□□□ -0.81
SNX13-201ENST00000409076 ABCC4O15439 1325 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 RPGRIP1LQ68CZ1 1315 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 TPM2P07951 284 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 LARP1BQ659C4 914 aaKnown RBP9.99□□□□□ -0.81
SNX13-201ENST00000409076 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 TRMT1Q9NXH9 659 aaKnown RBP9.99□□□□□ -0.81
SNX13-201ENST00000409076 IL16Q14005 1332 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 CHAF1AQ13111 956 aaPredicted RBP9.99□□□□□ -0.81
SNX13-201ENST00000409076 SLFNL1Q499Z3 407 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 HSP90AA4PQ58FG1 418 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 SPHKAPQ2M3C7 1700 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 RTL1A6NKG5 1358 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 PTPN21Q16825 1174 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 ZCCHC11Q5TAX3 1644 aaKnown RBP9.99□□□□□ -0.81
SNX13-201ENST00000409076 ZFYVE16Q7Z3T8 1539 aa9.99□□□□□ -0.81
SNX13-201ENST00000409076 GNAI3P08754 354 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 LUZP1Q86V48 1076 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 CREBRFQ8IUR6 639 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 ATP5J2-PTCD1G3V325 749 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 PTCD1O75127 700 aaKnown RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 ADCK5Q3MIX3 580 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 ZNF530Q6P9A1 599 aaPredicted RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 CCDC129Q6ZRS4 1044 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 POGZQ7Z3K3 1410 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 TTC21BQ7Z4L5 1316 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 CCT4P50991 539 aaKnown RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 CNTROBQ8N137 903 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 CLASRPQ8N2M8 674 aaKnown RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
SNX13-201ENST00000409076 CWC22Q9HCG8 908 aaKnown RBP9.98□□□□□ -0.81
SNX13-201ENST00000409076 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 OFD1O75665 1012 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 MBD3O95983 291 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 RHPN1Q8TCX5 695 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 STX6O43752 255 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 SYT1P21579 422 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 PTH1RQ03431 593 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
SNX13-201ENST00000409076 MYOM1P52179 1685 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms