RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 ERC1Q8IUD2 1116 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 PLCD3Q8N3E9 789 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 AATKQ6ZMQ8 1374 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 RIMS2Q9UQ26 1411 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 ERICH2A1L162 156 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 SLFN5Q08AF3 891 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 TRDNQ13061 729 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 AMER1Q5JTC6 1135 aaPredicted RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 ZNF446Q9NWS9 450 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 PCM1Q15154 2024 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 ATP7AQ04656 1500 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 ZC3H6P61129 1189 aaKnown RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 SKOR2Q2VWA4 1001 aaPredicted RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 MCM10Q7L590 875 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 PRDM11Q9NQV5 511 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 FAM53CQ9NYF3 392 aa4.58□□□□□ -1.68
RGPD4-201ENST00000408999 NKTRP30414 1462 aaKnown RBP4.58□□□□□ -1.68
RGPD4-201ENST00000408999 MIS18AQ9NYP9 233 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 EMILIN1Q9Y6C2 1016 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 DDX49Q9Y6V7 483 aaKnown RBP4.57□□□□□ -1.68
RGPD4-201ENST00000408999 ASXL1Q8IXJ9 1541 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 GCC2Q8IWJ2 1684 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 CPLX1O14810 134 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 ATF7IPQ6VMQ6 1270 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 IFT57Q9NWB7 429 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 PPIP5K1Q6PFW1 1433 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 MAP4K4O95819 1239 aaPredicted RBP4.57□□□□□ -1.68
RGPD4-201ENST00000408999 SRCIN1Q9C0H9 1055 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 SIL1Q9H173 461 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 ST7Q9NRC1 585 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 ANKRD36BQ8N2N9 1353 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 IRF6O14896 467 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 THUMPD2Q9BTF0 503 aaKnown RBP4.57□□□□□ -1.68
RGPD4-201ENST00000408999 LRRCC1Q9C099 1032 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 CNNM1Q9NRU3 951 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 PHF8Q9UPP1 1060 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 SMC3Q9UQE7 1217 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 UHRF1BP1LA0JNW5 1464 aa4.57□□□□□ -1.68
RGPD4-201ENST00000408999 DHX16O60231 1041 aaKnown RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CLCN1P35523 988 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CLASRPQ8N2M8 674 aaKnown RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 PHF23Q9BUL5 403 aaPredicted RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 MYO5CQ9NQX4 1742 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 PLSCR1O15162 318 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 GSE1Q14687 1217 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CTDP1Q9Y5B0 961 aaPredicted RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 NBPF19A0A087WUL8 3843 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 PSMA5P28066 241 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 DCTN1Q14203 1278 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 TPD52L1Q16890 204 aaPredicted RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CPLX2Q6PUV4 134 aaKnown RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CHMP5Q9NZZ3 219 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 TBC1D2BQ9UPU7 963 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 ABCC1P33527 1531 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 VPS37CA5D8V6 355 aaPredicted RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 HIP1O00291 1037 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 ADCY10Q96PN6 1610 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CCDC158Q5M9N0 1113 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CHADLQ6NUI6 762 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 RALYLQ86SE5 291 aaKnown RBP4.56□□□□□ -1.68
RGPD4-201ENST00000408999 LRRN4CLQ8ND94 238 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 RGS22Q8NE09 1264 aa4.56□□□□□ -1.68
RGPD4-201ENST00000408999 CHD1O14646 1710 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 ABCC11Q96J66 1382 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 ADGRL2O95490 1459 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.55□□□□□ -1.68
RGPD4-201ENST00000408999 KDM4AO75164 1064 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 CHD1LQ86WJ1 897 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 TMEM57Q8N5G2 664 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 DUSP27Q5VZP5 1158 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 ACEP12821 1306 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 SECISBP2LQ93073 1101 aaKnown RBP4.55□□□□□ -1.68
RGPD4-201ENST00000408999 PRDM10Q9NQV6 1147 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 TCEAL9Q9UHQ7 104 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 TTC21BQ7Z4L5 1316 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 PES1O00541 588 aaKnown RBP4.55□□□□□ -1.68
RGPD4-201ENST00000408999 AACSQ86V21 672 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 BICD2Q8TD16 824 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 PDLIM2Q96JY6 352 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 IL25Q9H293 177 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 TMOD3Q9NYL9 352 aa4.55□□□□□ -1.68
RGPD4-201ENST00000408999 GOLGA6L19H0YKK7 550 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 KRT28Q7Z3Y7 464 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 KDM5AP29375 1690 aaKnown RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 TPM2P07951 284 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 NUCB2P80303 420 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 AMOTQ4VCS5 1084 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 SRGAP3O43295 1099 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 ALDH1L2Q3SY69 923 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 PAXIP1Q6ZW49 1069 aaPredicted RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 ZFP91Q96JP5 570 aaPredicted RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 GNL3LQ9NVN8 582 aaKnown RBP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 ARHGEF5Q12774 1597 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 SPHKAPQ2M3C7 1700 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 ZFYVE16Q7Z3T8 1539 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.54□□□□□ -1.68
RGPD4-201ENST00000408999 CCDC57Q2TAC2 916 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms