RNA–Protein interactions for RNA: ENST00000408028.6

SLC8A1-209, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5 BASIC

Gene SLC8A1, Length 2,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-209ENST00000408028 RREB1Q92766 1687 aa11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 RXRBP28702 533 aa11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 GNAI1P63096 354 aa11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
SLC8A1-209ENST00000408028 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
SLC8A1-209ENST00000408028 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
SLC8A1-209ENST00000408028 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
SLC8A1-209ENST00000408028 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
SLC8A1-209ENST00000408028 TNS1Q9HBL0 1735 aaKnown RBP11.28□□□□□ -0.6
SLC8A1-209ENST00000408028 CACNA1FO60840 1977 aa11.27□□□□□ -0.6
SLC8A1-209ENST00000408028 CHL1O00533 1208 aa11.27□□□□□ -0.6
SLC8A1-209ENST00000408028 HOXB7P09629 217 aa11.27□□□□□ -0.6
SLC8A1-209ENST00000408028 SLC52A2Q9HAB3 445 aa11.27□□□□□ -0.6
SLC8A1-209ENST00000408028 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
SLC8A1-209ENST00000408028 C5P01031 1676 aa11.27□□□□□ -0.61
SLC8A1-209ENST00000408028 SLFN5Q08AF3 891 aa11.27□□□□□ -0.61
SLC8A1-209ENST00000408028 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
SLC8A1-209ENST00000408028 IL17REQ8NFR9 667 aa11.27□□□□□ -0.61
SLC8A1-209ENST00000408028 MSH5O43196 834 aa11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 BTAF1O14981 1849 aa11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 MARCH10Q8NA82 808 aaPredicted RBP11.26□□□□□ -0.61
SLC8A1-209ENST00000408028 FAM196AQ6ZSG2 479 aa11.25□□□□□ -0.61
SLC8A1-209ENST00000408028 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
SLC8A1-209ENST00000408028 TJP1Q07157 1748 aa11.24□□□□□ -0.61
SLC8A1-209ENST00000408028 KRT27Q7Z3Y8 459 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 VSIG10Q8N0Z9 540 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 TEFQ10587 303 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 POTEAQ6S8J7 498 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
SLC8A1-209ENST00000408028 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
SLC8A1-209ENST00000408028 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
SLC8A1-209ENST00000408028 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
SLC8A1-209ENST00000408028 QSER1Q2KHR3 1735 aa11.22□□□□□ -0.61
SLC8A1-209ENST00000408028 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
SLC8A1-209ENST00000408028 CABP4P57796 275 aa11.21□□□□□ -0.61
SLC8A1-209ENST00000408028 MCM10Q7L590 875 aa11.21□□□□□ -0.61
SLC8A1-209ENST00000408028 ERBB4Q15303 1308 aa11.21□□□□□ -0.61
SLC8A1-209ENST00000408028 MPRIPQ6WCQ1 1025 aa11.21□□□□□ -0.62
SLC8A1-209ENST00000408028 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.62
SLC8A1-209ENST00000408028 LGR6Q9HBX8 967 aa11.21□□□□□ -0.62
SLC8A1-209ENST00000408028 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.62
SLC8A1-209ENST00000408028 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.62
SLC8A1-209ENST00000408028 TAF1LQ8IZX4 1826 aa11.2□□□□□ -0.62
SLC8A1-209ENST00000408028 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
SLC8A1-209ENST00000408028 ZNF790Q6PG37 636 aa11.19□□□□□ -0.62
SLC8A1-209ENST00000408028 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
SLC8A1-209ENST00000408028 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
SLC8A1-209ENST00000408028 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
SLC8A1-209ENST00000408028 TEX13AQ9BXU3 409 aaPredicted RBP11.19□□□□□ -0.62
SLC8A1-209ENST00000408028 EIF4A1P60842 406 aaKnown RBP11.18□□□□□ -0.62
SLC8A1-209ENST00000408028 ALDH1L2Q3SY69 923 aa11.18□□□□□ -0.62
SLC8A1-209ENST00000408028 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
SLC8A1-209ENST00000408028 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
SLC8A1-209ENST00000408028 RGL2O15211 777 aa11.18□□□□□ -0.62
SLC8A1-209ENST00000408028 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
SLC8A1-209ENST00000408028 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
SLC8A1-209ENST00000408028 PIGBQ92521 554 aa11.17□□□□□ -0.62
SLC8A1-209ENST00000408028 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
SLC8A1-209ENST00000408028 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
SLC8A1-209ENST00000408028 PLSCR1O15162 318 aa11.16□□□□□ -0.62
SLC8A1-209ENST00000408028 TTC5Q8N0Z6 440 aa11.16□□□□□ -0.62
SLC8A1-209ENST00000408028 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 PPP4R2Q9NY27 417 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 PALLDQ8WX93 1383 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
SLC8A1-209ENST00000408028 GIGYF1O75420 1035 aaPredicted RBP11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 BCORQ6W2J9 1755 aa11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 VAMP4O75379 141 aa11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 C4BP0C0L5 1744 aa11.14□□□□□ -0.63
SLC8A1-209ENST00000408028 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
SLC8A1-209ENST00000408028 NUP188Q5SRE5 1749 aa11.13□□□□□ -0.63
SLC8A1-209ENST00000408028 A0A0G2JS52 829 aa11.13□□□□□ -0.63
SLC8A1-209ENST00000408028 TWISTNBQ3B726 338 aaPredicted RBP11.13□□□□□ -0.63
SLC8A1-209ENST00000408028 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
SLC8A1-209ENST00000408028 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
SLC8A1-209ENST00000408028 ARHGAP45Q92619 1136 aa11.12□□□□□ -0.63
SLC8A1-209ENST00000408028 SCN7AQ01118 1682 aa11.12□□□□□ -0.63
SLC8A1-209ENST00000408028 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
SLC8A1-209ENST00000408028 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
SLC8A1-209ENST00000408028 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
SLC8A1-209ENST00000408028 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
SLC8A1-209ENST00000408028 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
SLC8A1-209ENST00000408028 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
SLC8A1-209ENST00000408028 PTPRCP08575 1304 aa11.1□□□□□ -0.63
SLC8A1-209ENST00000408028 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
SLC8A1-209ENST00000408028 C8orf58Q8NAV2 365 aa11.1□□□□□ -0.63
SLC8A1-209ENST00000408028 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
SLC8A1-209ENST00000408028 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms