RNA–Protein interactions for RNA: ENST00000407230.5

NCOA1-206, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene NCOA1, Length 4,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-206ENST00000407230 ZRSR2Q15696 482 aaKnown RBP6.42□□□□□ -1.38
NCOA1-206ENST00000407230 LARP1Q6PKG0 1096 aaKnown RBP6.42□□□□□ -1.38
NCOA1-206ENST00000407230 TAX1BP1Q86VP1 789 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 PPP1R1BQ9UD71 204 aaPredicted RBP6.42□□□□□ -1.38
NCOA1-206ENST00000407230 PRXQ9BXM0 1461 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 HECW1Q76N89 1606 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 ANKRD62A6NC57 917 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 UBXN4Q92575 508 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 TAF4BQ92750 862 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 AKAP2Q9Y2D5 859 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 ABCC11Q96J66 1382 aa6.42□□□□□ -1.38
NCOA1-206ENST00000407230 USP5P45974 858 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 SKAP1Q86WV1 359 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 KCNH5Q8NCM2 988 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 STARD3NLO95772 234 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 ANKRD18AQ8IVF6 992 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 CCDC102AQ96A19 550 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 GOLGA6L7A0A1B0GV03 622 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 IFIT1P09914 478 aaKnown RBP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 SFPQP23246 707 aaKnown RBP eCLIP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 TAF7Q15545 349 aaPredicted RBP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 CCDC183Q5T5S1 534 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 MYD88Q99836 296 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 PLCD4Q9BRC7 762 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 SCAND2PQ9GZW5 306 aaPredicted RBP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 SH2B1Q9NRF2 756 aaPredicted RBP6.41□□□□□ -1.38
NCOA1-206ENST00000407230 ANO10Q9NW15 660 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 NAIPQ13075 1403 aa6.41□□□□□ -1.38
NCOA1-206ENST00000407230 MINDY4BA8MYZ0 360 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 F6X3S4 739 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 PTCD1O75127 700 aaKnown RBP6.4□□□□□ -1.38
NCOA1-206ENST00000407230 PDCL2Q8N4E4 241 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 CCDC8Q9H0W5 538 aaPredicted RBP6.4□□□□□ -1.38
NCOA1-206ENST00000407230 KIF2AO00139 706 aaPredicted RBP6.4□□□□□ -1.38
NCOA1-206ENST00000407230 SSFA2P28290 1259 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 NME9Q86XW9 330 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 C8orf76Q96K31 380 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 POLA1P09884 1462 aaPredicted RBP6.4□□□□□ -1.38
NCOA1-206ENST00000407230 NKTRP30414 1462 aaKnown RBP6.4□□□□□ -1.38
NCOA1-206ENST00000407230 IFT140Q96RY7 1462 aa6.4□□□□□ -1.38
NCOA1-206ENST00000407230 PTPN14Q15678 1187 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 HSP90AB3PQ58FF7 597 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 JAKMIP3Q5VZ66 844 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 KLHL10Q6JEL2 608 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 NAPBQ9H115 298 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.4□□□□□ -1.39
NCOA1-206ENST00000407230 MPHOSPH10O00566 681 aaKnown RBP6.4□□□□□ -1.39
NCOA1-206ENST00000407230 GUCY1B3Q02153 619 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 USHBP1Q8N6Y0 703 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 ZNF397Q8NF99 534 aaPredicted RBP6.4□□□□□ -1.39
NCOA1-206ENST00000407230 CCDC148Q8NFR7 591 aa6.4□□□□□ -1.39
NCOA1-206ENST00000407230 MRC2Q9UBG0 1479 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 CCDC196A0A1B0GTZ2 297 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 C11orf95C9JLR9 678 aaPredicted RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 ZSCAN12O43309 604 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 TMCO3Q6UWJ1 677 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 DNAAF4Q8WXU2 420 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 EMILIN1Q9Y6C2 1016 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 MATR3P43243 847 aaKnown RBP eCLIP6.39□□□□□ -1.393e-7■■■■■ 27.4
NCOA1-206ENST00000407230 SF3B2Q13435 895 aaKnown RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 TBC1D2Q9BYX2 928 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 GBP3Q9H0R5 595 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 ZNF287Q9HBT7 754 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 SEC63Q9UGP8 760 aaKnown RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 SUPT6HQ7KZ85 1726 aaKnown RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 PLEKHH1Q9ULM0 1364 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 SSR1P43307 286 aaKnown RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 SPA17Q15506 151 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 CTCFLQ8NI51 663 aaPredicted RBP6.39□□□□□ -1.39
NCOA1-206ENST00000407230 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 TMOD3Q9NYL9 352 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 TMOD2Q9NZR1 351 aa6.39□□□□□ -1.39
NCOA1-206ENST00000407230 HMGB1P09429 215 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 TOP1P11387 765 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 AMOTQ4VCS5 1084 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 CAVIN4Q5BKX8 364 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 FKBP15Q5T1M5 1219 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 TNPO1Q92973 898 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 CRACR2AQ9BSW2 395 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 SNAPC4Q5SXM2 1469 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 NESP48681 1621 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 LRPPRCP42704 1394 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 CCDC141Q6ZP82 1450 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 ERICH4A6NGS2 130 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 PPP1R12BO60237 982 aaPredicted RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 EZRP15311 586 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 MAP3K12Q12852 859 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 IFIT5Q13325 482 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 TAF3Q5VWG9 929 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 ZNF652Q9Y2D9 606 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 CDK13Q14004 1512 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 RRP9O43818 475 aaKnown RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 KIF5CO60282 957 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 URI1O94763 535 aaPredicted RBP6.38□□□□□ -1.39
NCOA1-206ENST00000407230 TRIM27P14373 513 aa6.38□□□□□ -1.39
NCOA1-206ENST00000407230 CKAP2LQ8IYA6 745 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms