RNA–Protein interactions for RNA: ENST00000406902.5

GRAMD4-202, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-202ENST00000406902 PDCP20941 246 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 DAPK1P53355 1430 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 EZRP15311 586 aaKnown RBP16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 LIG1P18858 919 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.51■□□□□ 0.23
GRAMD4-202ENST00000406902 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 PPM1EQ8WY54 764 aa16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 SLU7O95391 586 aaKnown RBP16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
GRAMD4-202ENST00000406902 KRT85P78386 507 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 TMCO5BA8MYB1 307 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 ERC2O15083 957 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 TSC1Q92574 1164 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
GRAMD4-202ENST00000406902 ERICH2A1L162 156 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 LUZP1Q86V48 1076 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 RIOK3O14730 519 aaKnown RBP16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 TRIM29Q14134 588 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 KCNH5Q8NCM2 988 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
GRAMD4-202ENST00000406902 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 SERPINC1P01008 464 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 HMOX1P09601 288 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 SNW1Q13573 536 aaKnown RBP16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 CEP57Q86XR8 500 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 NECTIN2Q92692 538 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 CCDC47Q96A33 483 aaKnown RBP16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 RPAINQ86UA6 219 aa16.47■□□□□ 0.23
GRAMD4-202ENST00000406902 CPLX1O14810 134 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 PIBF1Q8WXW3 757 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 ZSCAN12O43309 604 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 RTEL1-TNFRSF6BF6WH68 1400 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 EBAG9O00559 213 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 CABP4P57796 275 aa16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
GRAMD4-202ENST00000406902 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.22
GRAMD4-202ENST00000406902 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
GRAMD4-202ENST00000406902 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
GRAMD4-202ENST00000406902 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
GRAMD4-202ENST00000406902 GNAI3P08754 354 aa16.45■□□□□ 0.22
GRAMD4-202ENST00000406902 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
GRAMD4-202ENST00000406902 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 NAA25Q14CX7 972 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 PCMTD1Q96MG8 357 aaPredicted RBP16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 CDK19Q9BWU1 502 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
GRAMD4-202ENST00000406902 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 NAIPQ13075 1403 aa16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 ABCC5O15440 1437 aa16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 MCM6Q14566 821 aa16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 AP1ARQ63HQ0 302 aa16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 CCDC186Q7Z3E2 898 aa16.43■□□□□ 0.22
GRAMD4-202ENST00000406902 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 NEUROD6Q96NK8 337 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 NEBLO76041 1014 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 MTHFSP49914 203 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 ZSCAN26Q16670 478 aa16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 SECISBP2LQ93073 1101 aaKnown RBP16.42■□□□□ 0.22
GRAMD4-202ENST00000406902 CBFA2T2O43439 604 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 CASQ1P31415 396 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 GSDMDP57764 484 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 ARHGAP29Q52LW3 1261 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 MCM3P25205 808 aa16.41■□□□□ 0.22
GRAMD4-202ENST00000406902 ENOX2Q16206 610 aaKnown RBP16.4■□□□□ 0.22
GRAMD4-202ENST00000406902 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
GRAMD4-202ENST00000406902 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms