RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 GBP3Q9H0R5 595 aa10.66□□□□□ -0.7
PSEN1-205ENST00000406768 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 PPP2R5AQ15172 486 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 SDF4Q9BRK5 362 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 SRRTQ9BXP5 876 aaKnown RBP10.65□□□□□ -0.7
PSEN1-205ENST00000406768 TCOF1Q13428 1488 aaKnown RBP10.65□□□□□ -0.7
PSEN1-205ENST00000406768 PTPRKQ15262 1439 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 SOX12O15370 315 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
PSEN1-205ENST00000406768 PDCP20941 246 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 CYP2C19P33261 490 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-205ENST00000406768 MPHOSPH10O00566 681 aaKnown RBP10.65□□□□□ -0.7
PSEN1-205ENST00000406768 ZNF853P0CG23 659 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 DNAI1Q9UI46 699 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
PSEN1-205ENST00000406768 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.71
PSEN1-205ENST00000406768 GPRASP1Q5JY77 1395 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 ANKRD36BQ8N2N9 1353 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
PSEN1-205ENST00000406768 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 FBXO38Q6PIJ6 1188 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 PLCD4Q9BRC7 762 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 KIF14Q15058 1648 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
PSEN1-205ENST00000406768 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
PSEN1-205ENST00000406768 TUBB4AP04350 444 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 LIG1P18858 919 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-205ENST00000406768 CEP57L1Q8IYX8 460 aa10.64□□□□□ -0.71
PSEN1-205ENST00000406768 GUCY2CP25092 1073 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 CLEC17AQ6ZS10 378 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 SSH1Q8WYL5 1049 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 LRMPQ12912 555 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 ANO6Q4KMQ2 910 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 PDILTQ8N807 584 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 SPATA32Q96LK8 384 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 TAOK2Q9UL54 1235 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 NEBLO76041 1014 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 CAVIN2O95810 425 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 ZKSCAN1P17029 563 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 KMT5BQ4FZB7 885 aa10.63□□□□□ -0.71
PSEN1-205ENST00000406768 DNAJC21Q5F1R6 531 aaKnown RBP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.63□□□□□ -0.71
PSEN1-205ENST00000406768 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 EBAG9O00559 213 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 TRIM66O15016 1216 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 ZSCAN12O43309 604 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 GADD45BO75293 160 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 TYRO3Q06418 890 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 MCTP2Q6DN12 878 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 CHAMP1Q96JM3 812 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 PER1O15534 1290 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 STX6O43752 255 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 MAGEA9P43362 315 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 SATB1Q01826 763 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 PAIP2Q9BPZ3 127 aaKnown RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 ERBINQ96RT1 1412 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 PLB1Q6P1J6 1458 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 CDK13Q14004 1512 aaKnown RBP10.62□□□□□ -0.71
PSEN1-205ENST00000406768 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 CXorf56Q9H5V9 222 aa10.62□□□□□ -0.71
PSEN1-205ENST00000406768 ERLIN2O94905 339 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 ACTN2P35609 894 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 SLC4A10Q6U841 1118 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 TICAM2Q86XR7 235 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 ERC1Q8IUD2 1116 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 ROCK1Q13464 1354 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 FMNL3Q8IVF7 1028 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 CPSF2Q9P2I0 782 aaKnown RBP10.61□□□□□ -0.71
PSEN1-205ENST00000406768 RAD50Q92878 1312 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 ZSCAN22P10073 491 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-205ENST00000406768 FBXO18Q8NFZ0 1043 aa10.61□□□□□ -0.71
PSEN1-205ENST00000406768 EVCP57679 992 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
PSEN1-205ENST00000406768 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 FERMT3Q86UX7 667 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 CRACR2AQ9BSW2 395 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-205ENST00000406768 PHACTR2O75167 634 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 GBP2P32456 591 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-205ENST00000406768 GYS2P54840 703 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-205ENST00000406768 PDRG1Q9NUG6 133 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 MAGI3Q5TCQ9 1506 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 KDM5BQ9UGL1 1544 aa10.6□□□□□ -0.71
PSEN1-205ENST00000406768 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms