RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 PKP1Q13835 747 aa22.63■■□□□ 1.21
EWSR1-207ENST00000406548 EXOC6BQ9Y2D4 811 aa22.63■■□□□ 1.21
EWSR1-207ENST00000406548 N4BP2Q86UW6 1770 aaPredicted RBP22.63■■□□□ 1.21
EWSR1-207ENST00000406548 SALL3Q9BXA9 1300 aa22.63■■□□□ 1.21
EWSR1-207ENST00000406548 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
EWSR1-207ENST00000406548 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
EWSR1-207ENST00000406548 ZGPATQ8N5A5 531 aaKnown RBP22.62■■□□□ 1.21
EWSR1-207ENST00000406548 FLIIQ13045 1269 aa22.62■■□□□ 1.21
EWSR1-207ENST00000406548 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
EWSR1-207ENST00000406548 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 LMBRD1Q9NUN5 540 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 GNAI3P08754 354 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
EWSR1-207ENST00000406548 CACNA1FO60840 1977 aa22.6■■□□□ 1.21
EWSR1-207ENST00000406548 NASPP49321 788 aaPredicted RBP22.6■■□□□ 1.21
EWSR1-207ENST00000406548 FKBP5Q13451 457 aaPredicted RBP22.6■■□□□ 1.21
EWSR1-207ENST00000406548 ZNF445P59923 1031 aa22.59■■□□□ 1.21
EWSR1-207ENST00000406548 CCDC173Q0VFZ6 552 aa22.59■■□□□ 1.21
EWSR1-207ENST00000406548 EID1Q9Y6B2 187 aa22.59■■□□□ 1.21
EWSR1-207ENST00000406548 FER1L4A9Z1Z3 1794 aa22.59■■□□□ 1.21
EWSR1-207ENST00000406548 GNAT3A8MTJ3 354 aa22.58■■□□□ 1.21
EWSR1-207ENST00000406548 MX1P20591 662 aa22.58■■□□□ 1.21
EWSR1-207ENST00000406548 TSHZ3Q63HK5 1081 aa22.58■■□□□ 1.21
EWSR1-207ENST00000406548 ESYT1Q9BSJ8 1104 aa22.58■■□□□ 1.21
EWSR1-207ENST00000406548 SLIT1O75093 1534 aa22.58■■□□□ 1.21
EWSR1-207ENST00000406548 PXDNLA1KZ92 1463 aa22.58■■□□□ 1.2
EWSR1-207ENST00000406548 PNMA6EA0A0J9YXQ4 647 aa22.57■■□□□ 1.2
EWSR1-207ENST00000406548 ATP8B2P98198 1209 aa22.57■■□□□ 1.2
EWSR1-207ENST00000406548 NAP1L5Q96NT1 182 aaPredicted RBP22.57■■□□□ 1.2
EWSR1-207ENST00000406548 PPP1R9BQ96SB3 815 aa22.57■■□□□ 1.2
EWSR1-207ENST00000406548 ZDHHC9Q9Y397 364 aa22.57■■□□□ 1.2
EWSR1-207ENST00000406548 NWD1Q149M9 1564 aa22.57■■□□□ 1.2
EWSR1-207ENST00000406548 MARF1Q9Y4F3 1742 aaKnown RBP22.57■■□□□ 1.2
EWSR1-207ENST00000406548 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
EWSR1-207ENST00000406548 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
EWSR1-207ENST00000406548 ARHGAP23Q9P227 1491 aa22.56■■□□□ 1.2
EWSR1-207ENST00000406548 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
EWSR1-207ENST00000406548 ZSCAN23Q3MJ62 389 aa22.55■■□□□ 1.2
EWSR1-207ENST00000406548 MAP3K5Q99683 1374 aa22.55■■□□□ 1.2
EWSR1-207ENST00000406548 NEK4P51957 841 aa22.55■■□□□ 1.2
EWSR1-207ENST00000406548 TBX22Q9Y458 520 aa22.55■■□□□ 1.2
EWSR1-207ENST00000406548 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
EWSR1-207ENST00000406548 MCCP23508 829 aa22.54■■□□□ 1.2
EWSR1-207ENST00000406548 MCM2P49736 904 aa22.54■■□□□ 1.2
EWSR1-207ENST00000406548 ANP32BQ92688 251 aaKnown RBP22.54■■□□□ 1.2
EWSR1-207ENST00000406548 NECTIN2Q92692 538 aa22.54■■□□□ 1.2
EWSR1-207ENST00000406548 HOXC9P31274 260 aa22.54■■□□□ 1.2
EWSR1-207ENST00000406548 TMX3Q96JJ7 454 aa22.54■■□□□ 1.2
EWSR1-207ENST00000406548 NLRP6P59044 892 aa22.53■■□□□ 1.2
EWSR1-207ENST00000406548 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
EWSR1-207ENST00000406548 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
EWSR1-207ENST00000406548 PRPF40AO75400 957 aaKnown RBP22.53■■□□□ 1.2
EWSR1-207ENST00000406548 CHMLP26374 656 aa22.53■■□□□ 1.2
EWSR1-207ENST00000406548 SRCIN1Q9C0H9 1055 aa22.53■■□□□ 1.2
EWSR1-207ENST00000406548 ANAPC15P60006 121 aa22.52■■□□□ 1.2
EWSR1-207ENST00000406548 BABAM1Q9NWV8 329 aa22.52■■□□□ 1.2
EWSR1-207ENST00000406548 ANKARQ7Z5J8 1434 aa22.52■■□□□ 1.2
EWSR1-207ENST00000406548 TRIM6-TRIM34B2RNG4 842 aa22.51■■□□□ 1.19
EWSR1-207ENST00000406548 IL17REQ8NFR9 667 aa22.51■■□□□ 1.19
EWSR1-207ENST00000406548 GPT2Q8TD30 523 aa22.51■■□□□ 1.19
EWSR1-207ENST00000406548 RILPL2Q969X0 211 aa22.51■■□□□ 1.19
EWSR1-207ENST00000406548 PALD1Q9ULE6 856 aa22.51■■□□□ 1.19
EWSR1-207ENST00000406548 AOX1Q06278 1338 aa22.5■■□□□ 1.19
EWSR1-207ENST00000406548 ANO2Q9NQ90 1003 aa22.5■■□□□ 1.19
EWSR1-207ENST00000406548 TAF7Q15545 349 aaPredicted RBP22.5■■□□□ 1.19
EWSR1-207ENST00000406548 CUL4AQ13619 759 aa22.49■■□□□ 1.19
EWSR1-207ENST00000406548 USP44Q9H0E7 712 aa22.49■■□□□ 1.19
EWSR1-207ENST00000406548 UBTFL1P0CB47 393 aaPredicted RBP22.49■■□□□ 1.19
EWSR1-207ENST00000406548 IL17RAQ96F46 866 aa22.48■■□□□ 1.19
EWSR1-207ENST00000406548 NUTM2GQ5VZR2 741 aa22.47■■□□□ 1.19
EWSR1-207ENST00000406548 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
EWSR1-207ENST00000406548 RBM27Q9P2N5 1060 aaKnown RBP22.47■■□□□ 1.19
EWSR1-207ENST00000406548 HDGFL1Q5TGJ6 251 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 BRD1O95696 1058 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 INTS4Q96HW7 963 aaKnown RBP22.46■■□□□ 1.19
EWSR1-207ENST00000406548 CHAMP1Q96JM3 812 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 RBSNQ9H1K0 784 aa22.46■■□□□ 1.19
EWSR1-207ENST00000406548 ZSCAN30Q86W11 494 aa22.45■■□□□ 1.18
EWSR1-207ENST00000406548 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
EWSR1-207ENST00000406548 LTV1Q96GA3 475 aaPredicted RBP22.45■■□□□ 1.18
EWSR1-207ENST00000406548 FOXD4L5Q5VV16 416 aaPredicted RBP22.44■■□□□ 1.18
EWSR1-207ENST00000406548 FOXD4L4Q8WXT5 416 aaPredicted RBP22.44■■□□□ 1.18
EWSR1-207ENST00000406548 IL1RAPL2Q9NP60 686 aa22.44■■□□□ 1.18
EWSR1-207ENST00000406548 EPB41L2O43491 1005 aaKnown RBP22.43■■□□□ 1.18
EWSR1-207ENST00000406548 PRKCSHP14314 528 aaPredicted RBP22.43■■□□□ 1.18
EWSR1-207ENST00000406548 PHAXQ9H814 394 aaKnown RBP22.43■■□□□ 1.18
EWSR1-207ENST00000406548 LTN1O94822 1766 aa22.43■■□□□ 1.18
EWSR1-207ENST00000406548 RAB11FIP3O75154 756 aa22.43■■□□□ 1.18
EWSR1-207ENST00000406548 MBD3O95983 291 aa22.43■■□□□ 1.18
EWSR1-207ENST00000406548 THEMISQ8N1K5 641 aaPredicted RBP22.43■■□□□ 1.18
EWSR1-207ENST00000406548 TMEM63CQ9P1W3 806 aa22.43■■□□□ 1.18
EWSR1-207ENST00000406548 NOL8Q76FK4 1167 aaKnown RBP22.42■■□□□ 1.18
EWSR1-207ENST00000406548 ABTB2Q8N961 1025 aa22.42■■□□□ 1.18
EWSR1-207ENST00000406548 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
EWSR1-207ENST00000406548 POLA2Q14181 598 aa22.42■■□□□ 1.18
EWSR1-207ENST00000406548 LRSAM1Q6UWE0 723 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms