RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 G2E3Q7L622 706 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 OTUD7AQ8TE49 926 aaPredicted RBP4.79□□□□□ -1.64
RTN4-209ENST00000405240 MAP3K5Q99683 1374 aa4.79□□□□□ -1.64
RTN4-209ENST00000405240 HOXC9P31274 260 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 MRE11P49959 708 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 RBM42Q9BTD8 480 aaKnown RBP4.78□□□□□ -1.64
RTN4-209ENST00000405240 GOLGA6L3A6NEY3 463 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 FOXO3O43524 673 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 ATP8B2P98198 1209 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 PKD1L3Q7Z443 1732 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 MRC1P22897 1456 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 USP42Q9H9J4 1324 aaKnown RBP4.78□□□□□ -1.64
RTN4-209ENST00000405240 PARP4Q9UKK3 1724 aaKnown RBP4.78□□□□□ -1.64
RTN4-209ENST00000405240 SLC4A2P04920 1241 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 POLA2Q14181 598 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 CWC22Q9HCG8 908 aaKnown RBP4.78□□□□□ -1.64
RTN4-209ENST00000405240 RRAGDQ9NQL2 400 aaPredicted RBP4.78□□□□□ -1.64
RTN4-209ENST00000405240 GLI3P10071 1580 aa4.78□□□□□ -1.64
RTN4-209ENST00000405240 PDE1AP54750 535 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 PLEKHG2Q9H7P9 1386 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 PLEKHG5O94827 1062 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 HOXB7P09629 217 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 GBP4Q96PP9 640 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 ZDHHC9Q9Y397 364 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 LAMB4A4D0S4 1761 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 GNAT3A8MTJ3 354 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 CUL4AQ13619 759 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 KLHL40Q2TBA0 621 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 GAS2L3Q86XJ1 694 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 ESF1Q9H501 851 aaKnown RBP4.77□□□□□ -1.65
RTN4-209ENST00000405240 GRPEL1Q9HAV7 217 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 EID1Q9Y6B2 187 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 HMMRO75330 724 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 BAG4O95429 457 aaKnown RBP4.77□□□□□ -1.65
RTN4-209ENST00000405240 GNAI2P04899 355 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 ZNF445P59923 1031 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 ANAPC15P60006 121 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 SPRYD3Q8NCJ5 442 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 SSH3Q8TE77 659 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 PPP1R9BQ96SB3 815 aa4.77□□□□□ -1.65
RTN4-209ENST00000405240 ERC2O15083 957 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 HSP90AB1P08238 724 aaKnown RBP4.76□□□□□ -1.65
RTN4-209ENST00000405240 SSFA2P28290 1259 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 CLCN1P35523 988 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 CCDC30Q5VVM6 783 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 THEMISQ8N1K5 641 aaPredicted RBP4.76□□□□□ -1.65
RTN4-209ENST00000405240 TSPYL4Q9UJ04 414 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 SMARCA5O60264 1052 aaPredicted RBP4.76□□□□□ -1.65
RTN4-209ENST00000405240 GNAI3P08754 354 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 NUCB2P80303 420 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 FLIIQ13045 1269 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 USP44Q9H0E7 712 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 LMBRD1Q9NUN5 540 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 REC8O95072 547 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 TAF7Q15545 349 aaPredicted RBP4.76□□□□□ -1.65
RTN4-209ENST00000405240 IP6K1Q92551 441 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 SLC26A8Q96RN1 970 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 ESYT1Q9BSJ8 1104 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 PANK2Q9BZ23 570 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 SRCIN1Q9C0H9 1055 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 UBR2Q8IWV8 1755 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 PAPPAQ13219 1627 aa4.76□□□□□ -1.65
RTN4-209ENST00000405240 SETD1BQ9UPS6 1966 aaKnown RBP4.75□□□□□ -1.65
RTN4-209ENST00000405240 PNMA6EA0A0J9YXQ4 647 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 MIS18AQ9NYP9 233 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 NUP188Q5SRE5 1749 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 MYH15Q9Y2K3 1946 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 CHMLP26374 656 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 CEBPAP49715 358 aaPredicted RBP4.75□□□□□ -1.65
RTN4-209ENST00000405240 MTX1Q13505 466 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 KLHL34Q8N239 644 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 KCNB2Q92953 911 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 INTS4Q96HW7 963 aaKnown RBP4.75□□□□□ -1.65
RTN4-209ENST00000405240 ARFGEF2Q9Y6D5 1785 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 PXDNQ92626 1479 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 F6X3S4 739 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 RAB11FIP3O75154 756 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 RTF1Q92541 710 aaKnown RBP4.75□□□□□ -1.65
RTN4-209ENST00000405240 LRRCC1Q9C099 1032 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 TCHHQ07283 1943 aa4.75□□□□□ -1.65
RTN4-209ENST00000405240 AFDNP55196 1824 aaKnown RBP4.75□□□□□ -1.65
RTN4-209ENST00000405240 UTYO14607 1347 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 STRCP1A6NGW2 1772 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 ADCY9O60503 1353 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 KCNA6P17658 529 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 MCM2P49736 904 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
RTN4-209ENST00000405240 CASC1Q6TDU7 716 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 PI4K2BQ8TCG2 481 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 RTN4Q9NQC3 1192 aaKnown RBP4.74□□□□□ -1.65
RTN4-209ENST00000405240 DDX60Q8IY21 1712 aaKnown RBP4.74□□□□□ -1.65
RTN4-209ENST00000405240 MX1P20591 662 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 BEND3Q5T5X7 828 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 SNRKQ9NRH2 765 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 BRD1O95696 1058 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 AMPHP49418 695 aa4.74□□□□□ -1.65
RTN4-209ENST00000405240 ANO8Q9HCE9 1232 aaPredicted RBP4.74□□□□□ -1.65
RTN4-209ENST00000405240 JCADQ9P266 1359 aa4.73□□□□□ -1.65
RTN4-209ENST00000405240 ST18O60284 1047 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms