RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 ITPK1Q13572 414 aa26.64■■□□□ 1.86
HDAC11-205ENST00000404548 ATG3Q9NT62 314 aa26.64■■□□□ 1.86
HDAC11-205ENST00000404548 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
HDAC11-205ENST00000404548 DCAF5Q96JK2 942 aa26.63■■□□□ 1.85
HDAC11-205ENST00000404548 GNPATO15228 680 aa26.61■■□□□ 1.85
HDAC11-205ENST00000404548 GIGYF1O75420 1035 aaPredicted RBP26.61■■□□□ 1.85
HDAC11-205ENST00000404548 AMOTQ4VCS5 1084 aa26.61■■□□□ 1.85
HDAC11-205ENST00000404548 PLEKHO1Q53GL0 409 aaPredicted RBP26.6■■□□□ 1.85
HDAC11-205ENST00000404548 CEP350Q5VT06 3117 aa26.59■■□□□ 1.85
HDAC11-205ENST00000404548 KDM6AO15550 1401 aaPredicted RBP26.57■■□□□ 1.84
HDAC11-205ENST00000404548 ADRA2BP18089 450 aa26.56■■□□□ 1.84
HDAC11-205ENST00000404548 RC3H1Q5TC82 1133 aaKnown RBP26.56■■□□□ 1.84
HDAC11-205ENST00000404548 SMIM5Q71RC9 77 aa26.56■■□□□ 1.84
HDAC11-205ENST00000404548 MORC1Q86VD1 984 aa26.56■■□□□ 1.84
HDAC11-205ENST00000404548 ADCY9O60503 1353 aa26.56■■□□□ 1.84
HDAC11-205ENST00000404548 SENP3-EIF4A1A0A087X0R7 540 aa26.55■■□□□ 1.84
HDAC11-205ENST00000404548 CNTNAP4Q9C0A0 1308 aa26.55■■□□□ 1.84
HDAC11-205ENST00000404548 COL5A3P25940 1745 aaPredicted RBP26.54■■□□□ 1.84
HDAC11-205ENST00000404548 ZNF530Q6P9A1 599 aaPredicted RBP26.54■■□□□ 1.84
HDAC11-205ENST00000404548 SLC4A9Q96Q91 983 aa26.54■■□□□ 1.84
HDAC11-205ENST00000404548 RTCBQ9Y3I0 505 aaKnown RBP26.54■■□□□ 1.84
HDAC11-205ENST00000404548 KNSTRNQ9Y448 316 aa26.53■■□□□ 1.84
HDAC11-205ENST00000404548 ATP10DQ9P241 1426 aa26.53■■□□□ 1.84
HDAC11-205ENST00000404548 CABP4P57796 275 aa26.51■■□□□ 1.83
HDAC11-205ENST00000404548 TRAPPC3LQ5T215 181 aa26.51■■□□□ 1.83
HDAC11-205ENST00000404548 NLGN1Q8N2Q7 840 aa26.51■■□□□ 1.83
HDAC11-205ENST00000404548 MMP10P09238 476 aa26.5■■□□□ 1.83
HDAC11-205ENST00000404548 C1orf141Q5JVX7 400 aa26.5■■□□□ 1.83
HDAC11-205ENST00000404548 AEBP1Q8IUX7 1158 aa26.5■■□□□ 1.83
HDAC11-205ENST00000404548 CCER1Q8TC90 406 aaPredicted RBP26.5■■□□□ 1.83
HDAC11-205ENST00000404548 KIF13BQ9NQT8 1826 aa26.5■■□□□ 1.83
HDAC11-205ENST00000404548 CICQ96RK0 1608 aaPredicted RBP26.5■■□□□ 1.83
HDAC11-205ENST00000404548 MTHFSP49914 203 aa26.49■■□□□ 1.83
HDAC11-205ENST00000404548 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
HDAC11-205ENST00000404548 RPS6KA4O75676 772 aa26.48■■□□□ 1.83
HDAC11-205ENST00000404548 IL13P35225 146 aa26.48■■□□□ 1.83
HDAC11-205ENST00000404548 AMER1Q5JTC6 1135 aaPredicted RBP26.47■■□□□ 1.83
HDAC11-205ENST00000404548 PXDNLA1KZ92 1463 aa26.47■■□□□ 1.83
HDAC11-205ENST00000404548 C10orf71Q711Q0 1435 aa26.47■■□□□ 1.83
HDAC11-205ENST00000404548 TGFB2P61812 414 aa26.46■■□□□ 1.83
HDAC11-205ENST00000404548 SULT6B1Q6IMI4 303 aa26.46■■□□□ 1.83
HDAC11-205ENST00000404548 ARHGEF1Q92888 912 aaKnown RBP26.46■■□□□ 1.83
HDAC11-205ENST00000404548 GYS1P13807 737 aa26.44■■□□□ 1.82
HDAC11-205ENST00000404548 KIAA1551Q9HCM1 1747 aa26.44■■□□□ 1.82
HDAC11-205ENST00000404548 RFC4P35249 363 aa26.43■■□□□ 1.82
HDAC11-205ENST00000404548 GPBP1L1Q9HC44 474 aaPredicted RBP26.43■■□□□ 1.82
HDAC11-205ENST00000404548 C4AP0C0L4 1744 aa26.42■■□□□ 1.82
HDAC11-205ENST00000404548 NFATC2IPQ8NCF5 419 aa26.42■■□□□ 1.82
HDAC11-205ENST00000404548 MYH14Q7Z406 1995 aaKnown RBP26.42■■□□□ 1.82
HDAC11-205ENST00000404548 SCN11AQ9UI33 1791 aa26.41■■□□□ 1.82
HDAC11-205ENST00000404548 AKAP4Q5JQC9 854 aa26.41■■□□□ 1.82
HDAC11-205ENST00000404548 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
HDAC11-205ENST00000404548 CCDC87Q9NVE4 849 aa26.4■■□□□ 1.82
HDAC11-205ENST00000404548 MRC1P22897 1456 aa26.4■■□□□ 1.82
HDAC11-205ENST00000404548 PTCD1O75127 700 aaKnown RBP26.39■■□□□ 1.82
HDAC11-205ENST00000404548 CRKLP46109 303 aaKnown RBP26.39■■□□□ 1.82
HDAC11-205ENST00000404548 TJP1Q07157 1748 aa26.39■■□□□ 1.81
HDAC11-205ENST00000404548 PARP3Q9Y6F1 533 aa26.37■■□□□ 1.81
HDAC11-205ENST00000404548 SLC52A2Q9HAB3 445 aa26.36■■□□□ 1.81
HDAC11-205ENST00000404548 WWC3Q9ULE0 1092 aa26.36■■□□□ 1.81
HDAC11-205ENST00000404548 USP42Q9H9J4 1324 aaKnown RBP26.36■■□□□ 1.81
HDAC11-205ENST00000404548 PER1O15534 1290 aaPredicted RBP26.35■■□□□ 1.81
HDAC11-205ENST00000404548 ADAMTS7Q9UKP4 1686 aa26.34■■□□□ 1.81
HDAC11-205ENST00000404548 N4BP2Q86UW6 1770 aaPredicted RBP26.33■■□□□ 1.81
HDAC11-205ENST00000404548 A0A0G2JLW4 131 aa26.32■■□□□ 1.8
HDAC11-205ENST00000404548 BRCA1P38398 1863 aaKnown RBP26.32■■□□□ 1.8
HDAC11-205ENST00000404548 NPC1L1Q9UHC9 1359 aa26.32■■□□□ 1.8
HDAC11-205ENST00000404548 INTS5Q6P9B9 1019 aaKnown RBP26.31■■□□□ 1.8
HDAC11-205ENST00000404548 BCS1LQ9Y276 419 aa26.31■■□□□ 1.8
HDAC11-205ENST00000404548 DPEP1P16444 411 aa26.3■■□□□ 1.8
HDAC11-205ENST00000404548 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
HDAC11-205ENST00000404548 ZNF526Q8TF50 670 aaPredicted RBP26.29■■□□□ 1.8
HDAC11-205ENST00000404548 LGR6Q9HBX8 967 aa26.29■■□□□ 1.8
HDAC11-205ENST00000404548 DIAPH1O60610 1272 aaKnown RBP26.28■■□□□ 1.8
HDAC11-205ENST00000404548 FKBP8Q14318 412 aa26.28■■□□□ 1.8
HDAC11-205ENST00000404548 SRP68Q9UHB9 627 aaKnown RBP26.28■■□□□ 1.8
HDAC11-205ENST00000404548 KCPQ6ZWJ8 1503 aa26.28■■□□□ 1.8
HDAC11-205ENST00000404548 HMOX1P09601 288 aa26.27■■□□□ 1.8
HDAC11-205ENST00000404548 KCNA3P22001 575 aa26.27■■□□□ 1.8
HDAC11-205ENST00000404548 SOS1Q07889 1333 aaPredicted RBP26.27■■□□□ 1.8
HDAC11-205ENST00000404548 DDR1Q08345 913 aa26.26■■□□□ 1.79
HDAC11-205ENST00000404548 DNAJC10Q8IXB1 793 aa26.26■■□□□ 1.79
HDAC11-205ENST00000404548 VSIG10Q8N0Z9 540 aa26.26■■□□□ 1.79
HDAC11-205ENST00000404548 ARFGEF1Q9Y6D6 1849 aa26.25■■□□□ 1.79
HDAC11-205ENST00000404548 COL3A1P02461 1466 aaPredicted RBP26.25■■□□□ 1.79
HDAC11-205ENST00000404548 KIF3CO14782 793 aa26.25■■□□□ 1.79
HDAC11-205ENST00000404548 FCHSD2O94868 740 aa26.25■■□□□ 1.79
HDAC11-205ENST00000404548 CYP19A1P11511 503 aaPredicted RBP26.25■■□□□ 1.79
HDAC11-205ENST00000404548 HSPA6P17066 643 aa26.25■■□□□ 1.79
HDAC11-205ENST00000404548 MTHFSDQ2M296 383 aaKnown RBP26.25■■□□□ 1.79
HDAC11-205ENST00000404548 TM4SF1P30408 202 aa26.24■■□□□ 1.79
HDAC11-205ENST00000404548 PIM2Q9P1W9 311 aa26.24■■□□□ 1.79
HDAC11-205ENST00000404548 POLRMTO00411 1230 aaKnown RBP26.23■■□□□ 1.79
HDAC11-205ENST00000404548 ZPR1O75312 459 aa26.23■■□□□ 1.79
HDAC11-205ENST00000404548 CC2D1BQ5T0F9 858 aaKnown RBP26.22■■□□□ 1.79
HDAC11-205ENST00000404548 ARHGAP27Q6ZUM4 889 aa26.22■■□□□ 1.79
HDAC11-205ENST00000404548 VIRMAQ69YN4 1812 aaKnown RBP26.22■■□□□ 1.79
HDAC11-205ENST00000404548 UBR2Q8IWV8 1755 aa26.22■■□□□ 1.79
HDAC11-205ENST00000404548 SLC39A6Q13433 755 aa26.21■■□□□ 1.79
HDAC11-205ENST00000404548 COL15A1P39059 1388 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms