RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-206ENST00000403136 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
CEACAM1-206ENST00000403136 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 ABCC4O15439 1325 aa16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 PTPRCP08575 1304 aa16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
CEACAM1-206ENST00000403136 HOXB7P09629 217 aa16.89■□□□□ 0.3
CEACAM1-206ENST00000403136 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.3
CEACAM1-206ENST00000403136 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.3
CEACAM1-206ENST00000403136 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
CEACAM1-206ENST00000403136 ADAMTS2O95450 1211 aa16.89■□□□□ 0.29
CEACAM1-206ENST00000403136 IGHDP01880 384 aa16.89■□□□□ 0.29
CEACAM1-206ENST00000403136 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
CEACAM1-206ENST00000403136 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
CEACAM1-206ENST00000403136 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
CEACAM1-206ENST00000403136 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
CEACAM1-206ENST00000403136 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
CEACAM1-206ENST00000403136 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
CEACAM1-206ENST00000403136 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 G2E3Q7L622 706 aa16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
CEACAM1-206ENST00000403136 CABP4P57796 275 aa16.86■□□□□ 0.29
CEACAM1-206ENST00000403136 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
CEACAM1-206ENST00000403136 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
CEACAM1-206ENST00000403136 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
CEACAM1-206ENST00000403136 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
CEACAM1-206ENST00000403136 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
CEACAM1-206ENST00000403136 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
CEACAM1-206ENST00000403136 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
CEACAM1-206ENST00000403136 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
CEACAM1-206ENST00000403136 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
CEACAM1-206ENST00000403136 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
CEACAM1-206ENST00000403136 FLIIQ13045 1269 aa16.84■□□□□ 0.29
CEACAM1-206ENST00000403136 SLC39A6Q13433 755 aa16.84■□□□□ 0.29
CEACAM1-206ENST00000403136 KDM3BQ7LBC6 1761 aa16.84■□□□□ 0.29
CEACAM1-206ENST00000403136 RGS12O14924 1447 aa16.83■□□□□ 0.29
CEACAM1-206ENST00000403136 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
CEACAM1-206ENST00000403136 SCN11AQ9UI33 1791 aa16.82■□□□□ 0.28
CEACAM1-206ENST00000403136 JCADQ9P266 1359 aa16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 F6X3S4 739 aa16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 FKBP5Q13451 457 aaPredicted RBP16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 MRC1P22897 1456 aa16.8■□□□□ 0.28
CEACAM1-206ENST00000403136 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 EXOC5O00471 708 aa16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 THRAP3Q9Y2W1 955 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-206ENST00000403136 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
CEACAM1-206ENST00000403136 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
CEACAM1-206ENST00000403136 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
CEACAM1-206ENST00000403136 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
CEACAM1-206ENST00000403136 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
CEACAM1-206ENST00000403136 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
CEACAM1-206ENST00000403136 SLIT2O94813 1529 aa16.76■□□□□ 0.27
CEACAM1-206ENST00000403136 SPATA31A5Q5VU36 1347 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 SPATA31A7Q8IWB4 1347 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 CACNA1FO60840 1977 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 ANXA1P04083 346 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
CEACAM1-206ENST00000403136 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
CEACAM1-206ENST00000403136 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
CEACAM1-206ENST00000403136 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
CEACAM1-206ENST00000403136 PDIA6Q15084 440 aa16.74■□□□□ 0.27
CEACAM1-206ENST00000403136 PROSER3Q2NL68 480 aa16.74■□□□□ 0.27
CEACAM1-206ENST00000403136 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 MEIS3Q99687 375 aa16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 PLCH1Q4KWH8 1693 aa16.73■□□□□ 0.27
CEACAM1-206ENST00000403136 PI4KAP2A4QPH2 592 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 SIRT2Q8IXJ6 389 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 PI4KAP1Q8N8J0 262 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 PDZRN3Q9UPQ7 1066 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 FNBP4Q8N3X1 1017 aaPredicted RBP16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 DNAAF4Q8WXU2 420 aa16.72■□□□□ 0.27
CEACAM1-206ENST00000403136 HSPA1LP34931 641 aa16.71■□□□□ 0.27
CEACAM1-206ENST00000403136 RGS3P49796 1198 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms