RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 EPB41L2O43491 1005 aaKnown RBP5.04□□□□□ -1.6
CLHC1-201ENST00000401408 ERCC5P28715 1186 aaPredicted RBP5.04□□□□□ -1.6
CLHC1-201ENST00000401408 C11orf96Q7Z7L8 435 aa5.04□□□□□ -1.6
CLHC1-201ENST00000401408 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
CLHC1-201ENST00000401408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.04□□□□□ -1.62e-6■■■■■ 149.1
CLHC1-201ENST00000401408 SNRKQ9NRH2 765 aa5.04□□□□□ -1.6
CLHC1-201ENST00000401408 CHD2O14647 1828 aaKnown RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 ZNF500O60304 480 aaPredicted RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 RECKO95980 971 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 MS4A1P11836 297 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 VAMP1P23763 118 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 SSFA2P28290 1259 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 SRPK2P78362 688 aaKnown RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 PDAP1Q13442 181 aaKnown RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 NPAS4Q8IUM7 802 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 CCAR1Q8IX12 1150 aaKnown RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 CACTIN-AS1Q8N1I8 211 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 TANGO6Q9C0B7 1094 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 GDPD2Q9HCC8 539 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 NOP58Q9Y2X3 529 aaKnown RBP5.03□□□□□ -1.6
CLHC1-201ENST00000401408 MROH1Q8NDA8 1641 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 TTC36A6NLP5 189 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 BDNFP23560 247 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 HNRNPMP52272 730 aaKnown RBP eCLIP5.03□□□□□ -1.62e-6■■■■□ 25
CLHC1-201ENST00000401408 GYS2P54840 703 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 CDCA8Q53HL2 280 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 IFFO2Q5TF58 517 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 AMOTL1Q8IY63 956 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 SLAIN2Q9P270 581 aa5.03□□□□□ -1.6
CLHC1-201ENST00000401408 BIRC2Q13490 618 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 CCDC144BQ3MJ40 725 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 CFAP70Q5T0N1 1121 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 DCAF8Q5TAQ9 597 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 ZNF280DQ6N043 979 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 CUEDC1Q9NWM3 386 aaPredicted RBP5.02□□□□□ -1.61
CLHC1-201ENST00000401408 BCL9LQ86UU0 1499 aa5.02□□□□□ -1.61
CLHC1-201ENST00000401408 MAST1Q9Y2H9 1570 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 GPR37O15354 613 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 HOXA2O43364 376 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 KCNA6P17658 529 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 POLD1P28340 1107 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 MAP2K5Q13163 448 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 CCDC96Q2M329 555 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 NBPF11Q86T75 865 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 ZNF710Q8N1W2 664 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 FBXO9Q9UK97 447 aaPredicted RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 G3BP2Q9UN86 482 aaKnown RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 ATAD2Q6PL18 1390 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 CFAP65Q6ZU64 1925 aaKnown RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 NCOA3Q9Y6Q9 1424 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 IRF6O14896 467 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 STK10O94804 968 aaKnown RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 MARSP56192 900 aaKnown RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 RHBDL3P58872 404 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 RBM6P78332 1123 aaKnown RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 NLGN1Q8N2Q7 840 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 PROCA1Q8NCQ7 364 aaPredicted RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 CCDC18Q5T9S5 1454 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 AFF2P51816 1311 aa5.01□□□□□ -1.61
CLHC1-201ENST00000401408 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.01□□□□□ -1.61
CLHC1-201ENST00000401408 SETD5Q9C0A6 1442 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 CCDC189A1A4V9 331 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 NRDCO43847 1150 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 ABL2P42684 1182 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 LMOD3Q0VAK6 560 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 TSNAXIP1Q2TAA8 658 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 NBPF1Q3BBV0 1214 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 TRAF7Q6Q0C0 670 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 GIGYF2Q6Y7W6 1299 aaKnown RBP5□□□□□ -1.61
CLHC1-201ENST00000401408 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 OXER1Q8TDS5 423 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 DHX38Q92620 1227 aaKnown RBP5□□□□□ -1.61
CLHC1-201ENST00000401408 RPS6KC1Q96S38 1066 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 TBX22Q9Y458 520 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 PIK3C2BO00750 1634 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 CASKIN1Q8WXD9 1431 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 ZRANB2O95218 330 aaKnown RBP eCLIP5□□□□□ -1.61
CLHC1-201ENST00000401408 TCEAL1Q15170 157 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 ZCRB1Q8TBF4 217 aaKnown RBP5□□□□□ -1.61
CLHC1-201ENST00000401408 SENP7Q9BQF6 1050 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 TMEM106CQ9BVX2 250 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 ARHGEF10LQ9HCE6 1279 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 PRR12Q9ULL5 1215 aa5□□□□□ -1.61
CLHC1-201ENST00000401408 TBX4P57082 545 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 PPP4CP60510 307 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 AXDND1Q5T1B0 1012 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 B4GALNT3Q6L9W6 998 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 GET4Q7L5D6 327 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 CREBRFQ8IUR6 639 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 RBM33Q96EV2 1170 aaKnown RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 SCYL1Q96KG9 808 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 SWAP70Q9UH65 585 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 FRMD4BQ9Y2L6 1034 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 TMEM2Q9UHN6 1383 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 EEA1Q15075 1411 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 ARHGAP31Q2M1Z3 1444 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 LAMC1P11047 1609 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 COPB2P35606 906 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms