RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 WASHC2AQ641Q2 1341 aa11.48□□□□□ -0.57
RFKP1-201ENST00000400940 KDRP35968 1356 aa11.48□□□□□ -0.57
RFKP1-201ENST00000400940 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
RFKP1-201ENST00000400940 SSFA2P28290 1259 aa11.47□□□□□ -0.57
RFKP1-201ENST00000400940 GPR162Q16538 588 aa11.47□□□□□ -0.57
RFKP1-201ENST00000400940 HSP90AB2PQ58FF8 381 aa11.47□□□□□ -0.57
RFKP1-201ENST00000400940 SYTL4Q96C24 671 aaPredicted RBP11.47□□□□□ -0.57
RFKP1-201ENST00000400940 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
RFKP1-201ENST00000400940 ADAMTS7Q9UKP4 1686 aa11.46□□□□□ -0.57
RFKP1-201ENST00000400940 NLGN2Q8NFZ4 835 aa11.46□□□□□ -0.57
RFKP1-201ENST00000400940 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
RFKP1-201ENST00000400940 TJP1Q07157 1748 aa11.44□□□□□ -0.58
RFKP1-201ENST00000400940 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
RFKP1-201ENST00000400940 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
RFKP1-201ENST00000400940 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
RFKP1-201ENST00000400940 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 FBLN1P23142 703 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
RFKP1-201ENST00000400940 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
RFKP1-201ENST00000400940 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
RFKP1-201ENST00000400940 USHBP1Q8N6Y0 703 aa11.42□□□□□ -0.58
RFKP1-201ENST00000400940 MRC1P22897 1456 aa11.42□□□□□ -0.58
RFKP1-201ENST00000400940 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 NRXN2Q9P2S2 1712 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 KCNQ4P56696 695 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 SIK1P57059 783 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 PIGBQ92521 554 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 AK7Q96M32 723 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
RFKP1-201ENST00000400940 SBF1O95248 1867 aa11.4□□□□□ -0.58
RFKP1-201ENST00000400940 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
RFKP1-201ENST00000400940 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
RFKP1-201ENST00000400940 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
RFKP1-201ENST00000400940 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
RFKP1-201ENST00000400940 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.58
RFKP1-201ENST00000400940 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.59
RFKP1-201ENST00000400940 CNTNAP4Q9C0A0 1308 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
RFKP1-201ENST00000400940 ERVV-2B6SEH9 535 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 PHKG2P15735 406 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 LHX8Q68G74 356 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 EYA1Q99502 592 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
RFKP1-201ENST00000400940 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
RFKP1-201ENST00000400940 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
RFKP1-201ENST00000400940 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
RFKP1-201ENST00000400940 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
RFKP1-201ENST00000400940 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
RFKP1-201ENST00000400940 RC3H1Q5TC82 1133 aaKnown RBP11.38□□□□□ -0.59
RFKP1-201ENST00000400940 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
RFKP1-201ENST00000400940 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
RFKP1-201ENST00000400940 AMIGO3Q86WK7 504 aa11.37□□□□□ -0.59
RFKP1-201ENST00000400940 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
RFKP1-201ENST00000400940 AFDNP55196 1824 aaKnown RBP11.37□□□□□ -0.59
RFKP1-201ENST00000400940 PCNTO95613 3336 aa11.37□□□□□ -0.59
RFKP1-201ENST00000400940 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
RFKP1-201ENST00000400940 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
RFKP1-201ENST00000400940 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
RFKP1-201ENST00000400940 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 TGFB2P61812 414 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 ITPK1Q13572 414 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
RFKP1-201ENST00000400940 AMOTQ4VCS5 1084 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
RFKP1-201ENST00000400940 GNPATO15228 680 aa11.34□□□□□ -0.59
RFKP1-201ENST00000400940 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
RFKP1-201ENST00000400940 ATG3Q9NT62 314 aa11.34□□□□□ -0.59
RFKP1-201ENST00000400940 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
RFKP1-201ENST00000400940 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
RFKP1-201ENST00000400940 HSPA6P17066 643 aa11.33□□□□□ -0.6
RFKP1-201ENST00000400940 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
RFKP1-201ENST00000400940 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
RFKP1-201ENST00000400940 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.6
RFKP1-201ENST00000400940 GABBR2O75899 941 aa11.32□□□□□ -0.6
RFKP1-201ENST00000400940 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
RFKP1-201ENST00000400940 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
RFKP1-201ENST00000400940 RTCBQ9Y3I0 505 aaKnown RBP11.32□□□□□ -0.6
RFKP1-201ENST00000400940 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
RFKP1-201ENST00000400940 KCPQ6ZWJ8 1503 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 RPS6KA4O75676 772 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 MMP10P09238 476 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
RFKP1-201ENST00000400940 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
RFKP1-201ENST00000400940 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
RFKP1-201ENST00000400940 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 KIF3CO14782 793 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 PHF14O94880 888 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 GYS1P13807 737 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
RFKP1-201ENST00000400940 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
RFKP1-201ENST00000400940 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms