RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 TWISTNBQ3B726 338 aaPredicted RBP20.8■□□□□ 0.92
CASP9-204ENST00000400777 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
CASP9-204ENST00000400777 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
CASP9-204ENST00000400777 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
CASP9-204ENST00000400777 GLI3P10071 1580 aa20.79■□□□□ 0.92
CASP9-204ENST00000400777 KRT24Q2M2I5 525 aa20.79■□□□□ 0.92
CASP9-204ENST00000400777 MRC1P22897 1456 aa20.78■□□□□ 0.92
CASP9-204ENST00000400777 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
CASP9-204ENST00000400777 VAMP4O75379 141 aa20.77■□□□□ 0.92
CASP9-204ENST00000400777 MARCH10Q8NA82 808 aaPredicted RBP20.77■□□□□ 0.92
CASP9-204ENST00000400777 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
CASP9-204ENST00000400777 VIRMAQ69YN4 1812 aaKnown RBP20.77■□□□□ 0.91
CASP9-204ENST00000400777 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
CASP9-204ENST00000400777 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
CASP9-204ENST00000400777 BCAR3O75815 825 aa20.76■□□□□ 0.91
CASP9-204ENST00000400777 KCNQ3O43525 872 aa20.75■□□□□ 0.91
CASP9-204ENST00000400777 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
CASP9-204ENST00000400777 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
CASP9-204ENST00000400777 RRP1P56182 461 aaKnown RBP20.75■□□□□ 0.91
CASP9-204ENST00000400777 BCL2L13Q9BXK5 485 aa20.75■□□□□ 0.91
CASP9-204ENST00000400777 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
CASP9-204ENST00000400777 NEFLP07196 543 aa20.74■□□□□ 0.91
CASP9-204ENST00000400777 SLC39A6Q13433 755 aa20.74■□□□□ 0.91
CASP9-204ENST00000400777 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
CASP9-204ENST00000400777 THSD7AQ9UPZ6 1657 aa20.74■□□□□ 0.91
CASP9-204ENST00000400777 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
CASP9-204ENST00000400777 ALDH1L2Q3SY69 923 aa20.73■□□□□ 0.91
CASP9-204ENST00000400777 SSH1Q8WYL5 1049 aa20.73■□□□□ 0.91
CASP9-204ENST00000400777 SMC4Q9NTJ3 1288 aa20.73■□□□□ 0.91
CASP9-204ENST00000400777 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
CASP9-204ENST00000400777 SEPT12Q8IYM1 358 aa20.72■□□□□ 0.91
CASP9-204ENST00000400777 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
CASP9-204ENST00000400777 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
CASP9-204ENST00000400777 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
CASP9-204ENST00000400777 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
CASP9-204ENST00000400777 PLIN1O60240 522 aa20.71■□□□□ 0.91
CASP9-204ENST00000400777 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
CASP9-204ENST00000400777 PIGBQ92521 554 aa20.7■□□□□ 0.9
CASP9-204ENST00000400777 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
CASP9-204ENST00000400777 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
CASP9-204ENST00000400777 HOXB7P09629 217 aa20.69■□□□□ 0.9
CASP9-204ENST00000400777 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
CASP9-204ENST00000400777 IRX6P78412 446 aaPredicted RBP20.69■□□□□ 0.9
CASP9-204ENST00000400777 FRAT1Q92837 279 aaPredicted RBP20.69■□□□□ 0.9
CASP9-204ENST00000400777 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
CASP9-204ENST00000400777 ACSBG1Q96GR2 724 aa20.68■□□□□ 0.9
CASP9-204ENST00000400777 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
CASP9-204ENST00000400777 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
CASP9-204ENST00000400777 BCL9O00512 1426 aa20.67■□□□□ 0.9
CASP9-204ENST00000400777 GIGYF1O75420 1035 aaPredicted RBP20.67■□□□□ 0.9
CASP9-204ENST00000400777 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
CASP9-204ENST00000400777 FKBP8Q14318 412 aa20.67■□□□□ 0.9
CASP9-204ENST00000400777 CCDC30Q5VVM6 783 aa20.66■□□□□ 0.9
CASP9-204ENST00000400777 HDGFL1Q5TGJ6 251 aa20.65■□□□□ 0.9
CASP9-204ENST00000400777 MRPL50Q8N5N7 158 aaKnown RBP20.65■□□□□ 0.9
CASP9-204ENST00000400777 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
CASP9-204ENST00000400777 KIF16BQ96L93 1317 aa20.65■□□□□ 0.9
CASP9-204ENST00000400777 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.9
CASP9-204ENST00000400777 RXRBP28702 533 aa20.64■□□□□ 0.9
CASP9-204ENST00000400777 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.9
CASP9-204ENST00000400777 NECTIN2Q92692 538 aa20.64■□□□□ 0.9
CASP9-204ENST00000400777 RGS17Q9UGC6 210 aaPredicted RBP20.64■□□□□ 0.9
CASP9-204ENST00000400777 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.9
CASP9-204ENST00000400777 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.9
CASP9-204ENST00000400777 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
CASP9-204ENST00000400777 STK31Q9BXU1 1019 aa20.64■□□□□ 0.89
CASP9-204ENST00000400777 PRAMEF22A3QJZ6 481 aa20.63■□□□□ 0.89
CASP9-204ENST00000400777 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
CASP9-204ENST00000400777 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
CASP9-204ENST00000400777 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
CASP9-204ENST00000400777 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
CASP9-204ENST00000400777 SLC4A2P04920 1241 aa20.62■□□□□ 0.89
CASP9-204ENST00000400777 KCNQ2O43526 872 aa20.62■□□□□ 0.89
CASP9-204ENST00000400777 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
CASP9-204ENST00000400777 ITGB4P16144 1822 aa20.61■□□□□ 0.89
CASP9-204ENST00000400777 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
CASP9-204ENST00000400777 KRT27Q7Z3Y8 459 aa20.61■□□□□ 0.89
CASP9-204ENST00000400777 PAPPAQ13219 1627 aa20.61■□□□□ 0.89
CASP9-204ENST00000400777 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
CASP9-204ENST00000400777 KCPQ6ZWJ8 1503 aa20.6■□□□□ 0.89
CASP9-204ENST00000400777 KAT6BQ8WYB5 2073 aa20.59■□□□□ 0.89
CASP9-204ENST00000400777 POTEAQ6S8J7 498 aa20.59■□□□□ 0.89
CASP9-204ENST00000400777 ATF7IPQ6VMQ6 1270 aa20.59■□□□□ 0.89
CASP9-204ENST00000400777 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
CASP9-204ENST00000400777 TRIM27P14373 513 aa20.58■□□□□ 0.88
CASP9-204ENST00000400777 ILDR1Q86SU0 546 aaPredicted RBP20.58■□□□□ 0.88
CASP9-204ENST00000400777 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.88
CASP9-204ENST00000400777 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.88
CASP9-204ENST00000400777 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.88
CASP9-204ENST00000400777 USP16Q9Y5T5 823 aa20.58■□□□□ 0.88
CASP9-204ENST00000400777 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
CASP9-204ENST00000400777 FTSJ3Q8IY81 847 aaKnown RBP20.57■□□□□ 0.88
CASP9-204ENST00000400777 CLUAP1Q96AJ1 413 aa20.57■□□□□ 0.88
CASP9-204ENST00000400777 DBF4Q9UBU7 674 aaPredicted RBP20.57■□□□□ 0.88
CASP9-204ENST00000400777 EP400Q96L91 3159 aa20.57■□□□□ 0.88
CASP9-204ENST00000400777 MS4A1P11836 297 aa20.56■□□□□ 0.88
CASP9-204ENST00000400777 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
CASP9-204ENST00000400777 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
CASP9-204ENST00000400777 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
CASP9-204ENST00000400777 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms