RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 AMIGO3Q86WK7 504 aa20.83■□□□□ 0.93
ATG4B-202ENST00000400771 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
ATG4B-202ENST00000400771 LOC102724428A0A0B4J2F2 783 aa20.82■□□□□ 0.92
ATG4B-202ENST00000400771 SIK1P57059 783 aa20.82■□□□□ 0.92
ATG4B-202ENST00000400771 ITPK1Q13572 414 aa20.82■□□□□ 0.92
ATG4B-202ENST00000400771 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
ATG4B-202ENST00000400771 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
ATG4B-202ENST00000400771 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
ATG4B-202ENST00000400771 LINC00116Q8NCU8 138 aa20.81■□□□□ 0.92
ATG4B-202ENST00000400771 ATF5Q9Y2D1 282 aaPredicted RBP20.81■□□□□ 0.92
ATG4B-202ENST00000400771 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
ATG4B-202ENST00000400771 RSPH6AQ9H0K4 717 aa20.8■□□□□ 0.92
ATG4B-202ENST00000400771 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
ATG4B-202ENST00000400771 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
ATG4B-202ENST00000400771 COL23A1Q86Y22 540 aaPredicted RBP20.78■□□□□ 0.92
ATG4B-202ENST00000400771 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
ATG4B-202ENST00000400771 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
ATG4B-202ENST00000400771 CABP4P57796 275 aa20.77■□□□□ 0.92
ATG4B-202ENST00000400771 LGR6Q9HBX8 967 aa20.77■□□□□ 0.92
ATG4B-202ENST00000400771 SLC16A10Q8TF71 515 aa20.76■□□□□ 0.91
ATG4B-202ENST00000400771 PRKAR2BP31323 418 aa20.75■□□□□ 0.91
ATG4B-202ENST00000400771 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
ATG4B-202ENST00000400771 SLC52A2Q9HAB3 445 aa20.75■□□□□ 0.91
ATG4B-202ENST00000400771 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 KIF13BQ9NQT8 1826 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 ATP6V1AP38606 617 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
ATG4B-202ENST00000400771 SMIM5Q71RC9 77 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
ATG4B-202ENST00000400771 PPP1R1BQ9UD71 204 aaPredicted RBP20.74■□□□□ 0.91
ATG4B-202ENST00000400771 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
ATG4B-202ENST00000400771 AK7Q96M32 723 aa20.72■□□□□ 0.91
ATG4B-202ENST00000400771 GAS2L2Q8NHY3 880 aa20.71■□□□□ 0.91
ATG4B-202ENST00000400771 CNTNAP4Q9C0A0 1308 aa20.71■□□□□ 0.91
ATG4B-202ENST00000400771 LAMB4A4D0S4 1761 aa20.7■□□□□ 0.9
ATG4B-202ENST00000400771 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
ATG4B-202ENST00000400771 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
ATG4B-202ENST00000400771 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.9
ATG4B-202ENST00000400771 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
ATG4B-202ENST00000400771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
ATG4B-202ENST00000400771 SSFA2P28290 1259 aa20.69■□□□□ 0.9
ATG4B-202ENST00000400771 IL17REQ8NFR9 667 aa20.69■□□□□ 0.9
ATG4B-202ENST00000400771 FHDC1Q9C0D6 1143 aaPredicted RBP20.69■□□□□ 0.9
ATG4B-202ENST00000400771 SCN7AQ01118 1682 aa20.68■□□□□ 0.9
ATG4B-202ENST00000400771 GNPATO15228 680 aa20.68■□□□□ 0.9
ATG4B-202ENST00000400771 PHF14O94880 888 aa20.68■□□□□ 0.9
ATG4B-202ENST00000400771 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
ATG4B-202ENST00000400771 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
ATG4B-202ENST00000400771 ARXQ96QS3 562 aa20.68■□□□□ 0.9
ATG4B-202ENST00000400771 UTRNP46939 3433 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
ATG4B-202ENST00000400771 FCHSD2O94868 740 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
ATG4B-202ENST00000400771 SLC39A6Q13433 755 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 RALBP1Q15311 655 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 FLAD1Q8NFF5 587 aa20.67■□□□□ 0.9
ATG4B-202ENST00000400771 CHD4Q14839 1912 aa20.66■□□□□ 0.9
ATG4B-202ENST00000400771 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
ATG4B-202ENST00000400771 BCORQ6W2J9 1755 aa20.65■□□□□ 0.9
ATG4B-202ENST00000400771 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
ATG4B-202ENST00000400771 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
ATG4B-202ENST00000400771 SYT17Q9BSW7 474 aa20.65■□□□□ 0.9
ATG4B-202ENST00000400771 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.9
ATG4B-202ENST00000400771 MSH5O43196 834 aa20.64■□□□□ 0.89
ATG4B-202ENST00000400771 PLEKHF1Q96S99 279 aa20.64■□□□□ 0.89
ATG4B-202ENST00000400771 AFDNP55196 1824 aaKnown RBP20.63■□□□□ 0.89
ATG4B-202ENST00000400771 CRKLP46109 303 aaKnown RBP20.63■□□□□ 0.89
ATG4B-202ENST00000400771 POLD1P28340 1107 aa20.62■□□□□ 0.89
ATG4B-202ENST00000400771 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
ATG4B-202ENST00000400771 N4BP2Q86UW6 1770 aaPredicted RBP20.61■□□□□ 0.89
ATG4B-202ENST00000400771 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
ATG4B-202ENST00000400771 RPS6KA4O75676 772 aa20.6■□□□□ 0.89
ATG4B-202ENST00000400771 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
ATG4B-202ENST00000400771 ADRA2BP18089 450 aa20.59■□□□□ 0.89
ATG4B-202ENST00000400771 TEFQ10587 303 aa20.59■□□□□ 0.89
ATG4B-202ENST00000400771 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-202ENST00000400771 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
ATG4B-202ENST00000400771 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
ATG4B-202ENST00000400771 CYP19A1P11511 503 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-202ENST00000400771 MCM10Q7L590 875 aa20.58■□□□□ 0.89
ATG4B-202ENST00000400771 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.89
ATG4B-202ENST00000400771 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-202ENST00000400771 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
ATG4B-202ENST00000400771 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
ATG4B-202ENST00000400771 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
ATG4B-202ENST00000400771 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
ATG4B-202ENST00000400771 ZNF496Q96IT1 587 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-202ENST00000400771 C10orf71Q711Q0 1435 aa20.56■□□□□ 0.88
ATG4B-202ENST00000400771 KCNQ3O43525 872 aa20.56■□□□□ 0.88
ATG4B-202ENST00000400771 CCDC87Q9NVE4 849 aa20.56■□□□□ 0.88
ATG4B-202ENST00000400771 DLEC1Q9Y238 1755 aa20.55■□□□□ 0.88
ATG4B-202ENST00000400771 GYS1P13807 737 aa20.55■□□□□ 0.88
ATG4B-202ENST00000400771 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
ATG4B-202ENST00000400771 COL15A1P39059 1388 aa20.55■□□□□ 0.88
ATG4B-202ENST00000400771 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
ATG4B-202ENST00000400771 HTATSF1O43719 755 aaKnown RBP20.54■□□□□ 0.88
ATG4B-202ENST00000400771 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
ATG4B-202ENST00000400771 TTC5Q8N0Z6 440 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms