RNA–Protein interactions for RNA: ENST00000399751.6

LINC00680-201, long intergenic non-protein coding RNA 680, humanhuman

TSL 1 (best)

Gene LINC00680, Length 1,621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00680-201ENST00000399751 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
LINC00680-201ENST00000399751 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
LINC00680-201ENST00000399751 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
LINC00680-201ENST00000399751 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
LINC00680-201ENST00000399751 CABP4P57796 275 aa18.57■□□□□ 0.56
LINC00680-201ENST00000399751 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
LINC00680-201ENST00000399751 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
LINC00680-201ENST00000399751 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
LINC00680-201ENST00000399751 SCN11AQ9UI33 1791 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 THSD7AQ9UPZ6 1657 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 ADAMTS7Q9UKP4 1686 aa18.56■□□□□ 0.56
LINC00680-201ENST00000399751 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
LINC00680-201ENST00000399751 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
LINC00680-201ENST00000399751 ERVV-2B6SEH9 535 aa18.54■□□□□ 0.56
LINC00680-201ENST00000399751 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
LINC00680-201ENST00000399751 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
LINC00680-201ENST00000399751 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
LINC00680-201ENST00000399751 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.55
LINC00680-201ENST00000399751 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
LINC00680-201ENST00000399751 MRC1P22897 1456 aa18.5■□□□□ 0.55
LINC00680-201ENST00000399751 CCDC125Q86Z20 511 aa18.5■□□□□ 0.55
LINC00680-201ENST00000399751 TSPYL6Q8N831 410 aa18.5■□□□□ 0.55
LINC00680-201ENST00000399751 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
LINC00680-201ENST00000399751 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
LINC00680-201ENST00000399751 KRT27Q7Z3Y8 459 aa18.49■□□□□ 0.55
LINC00680-201ENST00000399751 TTC5Q8N0Z6 440 aa18.49■□□□□ 0.55
LINC00680-201ENST00000399751 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
LINC00680-201ENST00000399751 KRT24Q2M2I5 525 aa18.49■□□□□ 0.55
LINC00680-201ENST00000399751 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
LINC00680-201ENST00000399751 KCNQ3O43525 872 aa18.48■□□□□ 0.55
LINC00680-201ENST00000399751 VAMP4O75379 141 aa18.48■□□□□ 0.55
LINC00680-201ENST00000399751 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
LINC00680-201ENST00000399751 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
LINC00680-201ENST00000399751 TOGARAM1Q9Y4F4 1720 aa18.47■□□□□ 0.55
LINC00680-201ENST00000399751 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
LINC00680-201ENST00000399751 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
LINC00680-201ENST00000399751 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
LINC00680-201ENST00000399751 BCAR3O75815 825 aa18.45■□□□□ 0.54
LINC00680-201ENST00000399751 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
LINC00680-201ENST00000399751 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
LINC00680-201ENST00000399751 PIGBQ92521 554 aa18.45■□□□□ 0.54
LINC00680-201ENST00000399751 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
LINC00680-201ENST00000399751 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
LINC00680-201ENST00000399751 NEFLP07196 543 aa18.44■□□□□ 0.54
LINC00680-201ENST00000399751 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
LINC00680-201ENST00000399751 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
LINC00680-201ENST00000399751 KAT6BQ8WYB5 2073 aa18.44■□□□□ 0.54
LINC00680-201ENST00000399751 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
LINC00680-201ENST00000399751 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.43■□□□□ 0.54
LINC00680-201ENST00000399751 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
LINC00680-201ENST00000399751 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
LINC00680-201ENST00000399751 ITGB4P16144 1822 aa18.42■□□□□ 0.54
LINC00680-201ENST00000399751 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
LINC00680-201ENST00000399751 FAM182BQ5T319 152 aa18.42■□□□□ 0.54
LINC00680-201ENST00000399751 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
LINC00680-201ENST00000399751 BCL9O00512 1426 aa18.42■□□□□ 0.54
LINC00680-201ENST00000399751 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
LINC00680-201ENST00000399751 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
LINC00680-201ENST00000399751 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
LINC00680-201ENST00000399751 HOXB7P09629 217 aa18.41■□□□□ 0.54
LINC00680-201ENST00000399751 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
LINC00680-201ENST00000399751 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
LINC00680-201ENST00000399751 CHMP4AQ9BY43 222 aa18.41■□□□□ 0.54
LINC00680-201ENST00000399751 PLIN1O60240 522 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
LINC00680-201ENST00000399751 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 CCDC30Q5VVM6 783 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 DEFB132Q7Z7B7 95 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
LINC00680-201ENST00000399751 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
LINC00680-201ENST00000399751 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
LINC00680-201ENST00000399751 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
LINC00680-201ENST00000399751 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
LINC00680-201ENST00000399751 KCNQ2O43526 872 aa18.38■□□□□ 0.53
LINC00680-201ENST00000399751 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
LINC00680-201ENST00000399751 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
LINC00680-201ENST00000399751 IRX6P78412 446 aaPredicted RBP18.38■□□□□ 0.53
LINC00680-201ENST00000399751 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
LINC00680-201ENST00000399751 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
LINC00680-201ENST00000399751 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
LINC00680-201ENST00000399751 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
LINC00680-201ENST00000399751 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
LINC00680-201ENST00000399751 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
LINC00680-201ENST00000399751 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
LINC00680-201ENST00000399751 BRPF1P55201 1214 aaPredicted RBP18.35■□□□□ 0.53
LINC00680-201ENST00000399751 FAM196AQ6ZSG2 479 aa18.35■□□□□ 0.53
LINC00680-201ENST00000399751 NOB1Q9ULX3 412 aaKnown RBP18.35■□□□□ 0.53
LINC00680-201ENST00000399751 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
LINC00680-201ENST00000399751 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
LINC00680-201ENST00000399751 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
LINC00680-201ENST00000399751 FKBP8Q14318 412 aa18.34■□□□□ 0.53
LINC00680-201ENST00000399751 ZKSCAN2Q63HK3 967 aa18.34■□□□□ 0.53
LINC00680-201ENST00000399751 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
LINC00680-201ENST00000399751 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
LINC00680-201ENST00000399751 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
LINC00680-201ENST00000399751 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms