RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
CACNA1C-210ENST00000399606 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
CACNA1C-210ENST00000399606 NUCB2P80303 420 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 SMC2O95347 1197 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 GPTP24298 496 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 ZNF692Q9BU19 519 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 KCNA4P22459 653 aa12.85□□□□□ -0.35
CACNA1C-210ENST00000399606 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 LETM1O95202 739 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 EZRP15311 586 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 NCAPD3P42695 1498 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 STK38Q15208 465 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 NBPF5PQ86XG9 351 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-210ENST00000399606 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 CABP1Q9NZU7 370 aa12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 FOXO3O43524 673 aa12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 CCDC112Q8NEF3 446 aa12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
CACNA1C-210ENST00000399606 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 SLC5A1P13866 664 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 MSH6P52701 1360 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 GNAI2P04899 355 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 AACSQ86V21 672 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
CACNA1C-210ENST00000399606 ZBTB24O43167 697 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 BICD1Q96G01 975 aa12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 ZNF396Q96N95 335 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 LUC7LQ9NQ29 371 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 RABEP1Q15276 862 aa12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
CACNA1C-210ENST00000399606 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 ZWINTO95229 277 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 MYD88Q99836 296 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 KIF20AO95235 890 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
CACNA1C-210ENST00000399606 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 NAIPQ13075 1403 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 TRIM5Q9C035 493 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 CETN2P41208 172 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 CFTRP13569 1480 aa12.79□□□□□ -0.36
CACNA1C-210ENST00000399606 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 TSPY26PQ9H489 355 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 TWISTNBQ3B726 338 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 AKAP2Q9Y2D5 859 aa12.78□□□□□ -0.36
CACNA1C-210ENST00000399606 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 NLRP5P59047 1200 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 KIF22Q14807 665 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 APBB1IPQ7Z5R6 666 aaPredicted RBP12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 MPNDQ8N594 471 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.36
CACNA1C-210ENST00000399606 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms