RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
ITSN1-209ENST00000399352 MNAT1P51948 309 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 SCAPERQ9BY12 1400 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 BIN1O00499 593 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 SPECC1Q5M775 1068 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 WASF1Q92558 559 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 PAFAH1B1P43034 410 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 CCDC91Q7Z6B0 441 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
ITSN1-209ENST00000399352 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
ITSN1-209ENST00000399352 BAG4O95429 457 aaKnown RBP18.75■□□□□ 0.59
ITSN1-209ENST00000399352 WWC2Q6AWC2 1192 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 NEMFO60524 1076 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 CEP131Q9UPN4 1083 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
ITSN1-209ENST00000399352 CACNA2D4Q7Z3S7 1137 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 PRIMPOLQ96LW4 560 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 PRAM1Q96QH2 718 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 UBE4AQ14139 1066 aa18.75■□□□□ 0.59
ITSN1-209ENST00000399352 CCDC175P0C221 793 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 GSTTP1A0A1W2PQM5 241 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 SMC1AQ14683 1233 aaKnown RBP18.74■□□□□ 0.59
ITSN1-209ENST00000399352 NF2P35240 595 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 HLTFQ14527 1009 aaKnown RBP eCLIP18.74■□□□□ 0.59
ITSN1-209ENST00000399352 FKBP15Q5T1M5 1219 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 RAB11FIP3O75154 756 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 CLCN1P35523 988 aa18.74■□□□□ 0.59
ITSN1-209ENST00000399352 GSDMDP57764 484 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 LIG1P18858 919 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
ITSN1-209ENST00000399352 KRT222Q8N1A0 295 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 FSIP1Q8NA03 581 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 CUX1P39880 1505 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 PANK2Q9BZ23 570 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 SH2B1Q9NRF2 756 aaPredicted RBP18.73■□□□□ 0.59
ITSN1-209ENST00000399352 CABP1Q9NZU7 370 aa18.73■□□□□ 0.59
ITSN1-209ENST00000399352 HCLS1P14317 486 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-209ENST00000399352 C8orf76Q96K31 380 aa18.72■□□□□ 0.59
ITSN1-209ENST00000399352 THUMPD2Q9BTF0 503 aaKnown RBP18.72■□□□□ 0.59
ITSN1-209ENST00000399352 ZNF165P49910 485 aa18.72■□□□□ 0.59
ITSN1-209ENST00000399352 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
ITSN1-209ENST00000399352 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-209ENST00000399352 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
ITSN1-209ENST00000399352 CTAGE5O15320 804 aa18.72■□□□□ 0.59
ITSN1-209ENST00000399352 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
ITSN1-209ENST00000399352 BBXQ8WY36 941 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-209ENST00000399352 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
ITSN1-209ENST00000399352 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
ITSN1-209ENST00000399352 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
ITSN1-209ENST00000399352 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 KLHL40Q2TBA0 621 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 TDRD12Q587J7 1177 aaKnown RBP18.71■□□□□ 0.59
ITSN1-209ENST00000399352 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 KIF21BO75037 1637 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 ATP2C2O75185 946 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 MPHOSPH8Q99549 860 aa18.71■□□□□ 0.59
ITSN1-209ENST00000399352 USO1O60763 962 aaKnown RBP18.71■□□□□ 0.58
ITSN1-209ENST00000399352 GLRX3O76003 335 aaKnown RBP18.71■□□□□ 0.58
ITSN1-209ENST00000399352 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.58
ITSN1-209ENST00000399352 GNG11P61952 73 aa18.71■□□□□ 0.58
ITSN1-209ENST00000399352 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.58
ITSN1-209ENST00000399352 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
ITSN1-209ENST00000399352 GTF2A1P52655 376 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-209ENST00000399352 CNNM3Q8NE01 707 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 YEATS4O95619 227 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 USP5P45974 858 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 ISM2Q6H9L7 571 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 MAATS1Q7Z4T9 603 aa18.7■□□□□ 0.58
ITSN1-209ENST00000399352 CCDC12Q8WUD4 166 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-209ENST00000399352 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-209ENST00000399352 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 MATR3P43243 847 aaKnown RBP eCLIP18.69■□□□□ 0.58
ITSN1-209ENST00000399352 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
ITSN1-209ENST00000399352 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 PAXBP1Q9Y5B6 917 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 PLEKHH1Q9ULM0 1364 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 STX1AQ16623 288 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 GCOM1H8Y6P7 765 aaPredicted RBP18.69■□□□□ 0.58
ITSN1-209ENST00000399352 MYZAPP0CAP1 466 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 AIDAQ96BJ3 306 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 ANKRD30BQ9BXX2 1392 aa18.69■□□□□ 0.58
ITSN1-209ENST00000399352 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.58
ITSN1-209ENST00000399352 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
ITSN1-209ENST00000399352 GIMAP6Q6P9H5 292 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 ERBINQ96RT1 1412 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 MACROD2A1Z1Q3 448 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 GJB2P29033 226 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 CTNNBL1Q8WYA6 563 aaPredicted RBP18.68■□□□□ 0.58
ITSN1-209ENST00000399352 RSPH14Q9UHP6 348 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 STX6O43752 255 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 CETN2P41208 172 aa18.68■□□□□ 0.58
ITSN1-209ENST00000399352 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms