RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MTHFSP49914 203 aa18.19■□□□□ 0.5
VCX3A-202ENST00000398729 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
VCX3A-202ENST00000398729 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
VCX3A-202ENST00000398729 C5P01031 1676 aa18.18■□□□□ 0.5
VCX3A-202ENST00000398729 ADCY9O60503 1353 aa18.18■□□□□ 0.5
VCX3A-202ENST00000398729 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
VCX3A-202ENST00000398729 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
VCX3A-202ENST00000398729 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
VCX3A-202ENST00000398729 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-202ENST00000398729 KDRP35968 1356 aa18.17■□□□□ 0.5
VCX3A-202ENST00000398729 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
VCX3A-202ENST00000398729 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-202ENST00000398729 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
VCX3A-202ENST00000398729 HSPA6P17066 643 aa18.15■□□□□ 0.5
VCX3A-202ENST00000398729 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
VCX3A-202ENST00000398729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
VCX3A-202ENST00000398729 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
VCX3A-202ENST00000398729 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
VCX3A-202ENST00000398729 C1orf141Q5JVX7 400 aa18.14■□□□□ 0.49
VCX3A-202ENST00000398729 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
VCX3A-202ENST00000398729 LOC102724428A0A0B4J2F2 783 aa18.13■□□□□ 0.49
VCX3A-202ENST00000398729 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
VCX3A-202ENST00000398729 PHF14O94880 888 aa18.13■□□□□ 0.49
VCX3A-202ENST00000398729 SIK1P57059 783 aa18.13■□□□□ 0.49
VCX3A-202ENST00000398729 AK7Q96M32 723 aa18.13■□□□□ 0.49
VCX3A-202ENST00000398729 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
VCX3A-202ENST00000398729 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
VCX3A-202ENST00000398729 ATG3Q9NT62 314 aa18.12■□□□□ 0.49
VCX3A-202ENST00000398729 KIF3CO14782 793 aa18.11■□□□□ 0.49
VCX3A-202ENST00000398729 CABP4P57796 275 aa18.11■□□□□ 0.49
VCX3A-202ENST00000398729 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
VCX3A-202ENST00000398729 HMOX1P09601 288 aa18.1■□□□□ 0.49
VCX3A-202ENST00000398729 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
VCX3A-202ENST00000398729 SSFA2P28290 1259 aa18.09■□□□□ 0.49
VCX3A-202ENST00000398729 ITPK1Q13572 414 aa18.09■□□□□ 0.49
VCX3A-202ENST00000398729 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
VCX3A-202ENST00000398729 AKAP4Q5JQC9 854 aa18.07■□□□□ 0.48
VCX3A-202ENST00000398729 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
VCX3A-202ENST00000398729 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
VCX3A-202ENST00000398729 COL3A1P02461 1466 aaPredicted RBP18.06■□□□□ 0.48
VCX3A-202ENST00000398729 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
VCX3A-202ENST00000398729 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
VCX3A-202ENST00000398729 U2SURPO15042 1029 aaKnown RBP18.04■□□□□ 0.48
VCX3A-202ENST00000398729 GNPATO15228 680 aa18.04■□□□□ 0.48
VCX3A-202ENST00000398729 MMP10P09238 476 aa18.04■□□□□ 0.48
VCX3A-202ENST00000398729 DNAJC5GQ8N7S2 189 aa18.04■□□□□ 0.48
VCX3A-202ENST00000398729 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
VCX3A-202ENST00000398729 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
VCX3A-202ENST00000398729 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
VCX3A-202ENST00000398729 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
VCX3A-202ENST00000398729 PTCD1O75127 700 aaKnown RBP18.01■□□□□ 0.47
VCX3A-202ENST00000398729 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
VCX3A-202ENST00000398729 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
VCX3A-202ENST00000398729 TGFB2P61812 414 aa18■□□□□ 0.47
VCX3A-202ENST00000398729 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
VCX3A-202ENST00000398729 LGR6Q9HBX8 967 aa18■□□□□ 0.47
VCX3A-202ENST00000398729 RTCBQ9Y3I0 505 aaKnown RBP18■□□□□ 0.47
VCX3A-202ENST00000398729 COL5A3P25940 1745 aaPredicted RBP18■□□□□ 0.47
VCX3A-202ENST00000398729 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
VCX3A-202ENST00000398729 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
VCX3A-202ENST00000398729 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
VCX3A-202ENST00000398729 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
VCX3A-202ENST00000398729 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
VCX3A-202ENST00000398729 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
VCX3A-202ENST00000398729 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 TOMM70O94826 608 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 APLP1P51693 650 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 NLGN1Q8N2Q7 840 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 MRC1P22897 1456 aa17.98■□□□□ 0.47
VCX3A-202ENST00000398729 PCNTO95613 3336 aa17.97■□□□□ 0.47
VCX3A-202ENST00000398729 DPEP1P16444 411 aa17.97■□□□□ 0.47
VCX3A-202ENST00000398729 KCNA3P22001 575 aa17.97■□□□□ 0.47
VCX3A-202ENST00000398729 CICQ96RK0 1608 aaPredicted RBP17.97■□□□□ 0.47
VCX3A-202ENST00000398729 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 GYS1P13807 737 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 ADRA2BP18089 450 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
VCX3A-202ENST00000398729 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
VCX3A-202ENST00000398729 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
VCX3A-202ENST00000398729 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
VCX3A-202ENST00000398729 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
VCX3A-202ENST00000398729 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
VCX3A-202ENST00000398729 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
VCX3A-202ENST00000398729 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
VCX3A-202ENST00000398729 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
VCX3A-202ENST00000398729 TJP1Q07157 1748 aa17.93■□□□□ 0.46
VCX3A-202ENST00000398729 C10orf71Q711Q0 1435 aa17.93■□□□□ 0.46
VCX3A-202ENST00000398729 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
VCX3A-202ENST00000398729 RFC4P35249 363 aa17.93■□□□□ 0.46
VCX3A-202ENST00000398729 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
VCX3A-202ENST00000398729 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
VCX3A-202ENST00000398729 FCHSD2O94868 740 aa17.92■□□□□ 0.46
VCX3A-202ENST00000398729 TEFQ10587 303 aa17.91■□□□□ 0.46
VCX3A-202ENST00000398729 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
VCX3A-202ENST00000398729 CCDC87Q9NVE4 849 aa17.91■□□□□ 0.46
VCX3A-202ENST00000398729 KCPQ6ZWJ8 1503 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms