RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
CPSF1P1-201ENST00000397477 ERC2O15083 957 aa12.78□□□□□ -0.36
CPSF1P1-201ENST00000397477 SIL1Q9H173 461 aa12.78□□□□□ -0.36
CPSF1P1-201ENST00000397477 PIK3R4Q99570 1358 aa12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 PDE1AP54750 535 aa12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 SIRT1Q96EB6 747 aa12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 CHMP3Q9Y3E7 222 aa12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.36
CPSF1P1-201ENST00000397477 MX1P20591 662 aa12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 RABEP1Q15276 862 aa12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 PPP1R42Q7Z4L9 355 aa12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 MED14O60244 1454 aa12.77□□□□□ -0.37
CPSF1P1-201ENST00000397477 DIP2BQ9P265 1576 aa12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
CPSF1P1-201ENST00000397477 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 PRPF40AO75400 957 aaKnown RBP12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 PLEKHG1Q9ULL1 1385 aa12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
CPSF1P1-201ENST00000397477 CHRNA2Q15822 529 aa12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
CPSF1P1-201ENST00000397477 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 PKP1Q13835 747 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 PA2G4Q9UQ80 394 aaKnown RBP12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 PRAMEF22A3QJZ6 481 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 ANKRD24Q8TF21 1146 aa12.73□□□□□ -0.37
CPSF1P1-201ENST00000397477 GCP02774 474 aa12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
CPSF1P1-201ENST00000397477 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 USP32Q8NFA0 1604 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 ATP8B2P98198 1209 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 SNX21Q969T3 373 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 KIF2CQ99661 725 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
CPSF1P1-201ENST00000397477 ATF3P18847 181 aa12.71□□□□□ -0.38
CPSF1P1-201ENST00000397477 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.38
CPSF1P1-201ENST00000397477 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.38
CPSF1P1-201ENST00000397477 IP6K1Q92551 441 aa12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 CLASRPQ8N2M8 674 aaKnown RBP12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
CPSF1P1-201ENST00000397477 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 BAG4O95429 457 aaKnown RBP12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 NUCB2P80303 420 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
CPSF1P1-201ENST00000397477 AGLP35573 1532 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 PROSER3Q2NL68 480 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 AACSQ86V21 672 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 PALD1Q9ULE6 856 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 CPA1P15085 419 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 MPNDQ8N594 471 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
CPSF1P1-201ENST00000397477 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 MRE11P49959 708 aa12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 SKOR2Q2VWA4 1001 aaPredicted RBP12.67□□□□□ -0.38
CPSF1P1-201ENST00000397477 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 FGD1P98174 961 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
CPSF1P1-201ENST00000397477 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms