RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
SYNE4-203ENST00000397428 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
SYNE4-203ENST00000397428 PANK3Q9H999 370 aa16.44■□□□□ 0.22
SYNE4-203ENST00000397428 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-203ENST00000397428 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
SYNE4-203ENST00000397428 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
SYNE4-203ENST00000397428 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
SYNE4-203ENST00000397428 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
SYNE4-203ENST00000397428 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
SYNE4-203ENST00000397428 ADCY9O60503 1353 aa16.41■□□□□ 0.22
SYNE4-203ENST00000397428 ZNF831Q5JPB2 1677 aa16.41■□□□□ 0.22
SYNE4-203ENST00000397428 MMP10P09238 476 aa16.41■□□□□ 0.22
SYNE4-203ENST00000397428 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
SYNE4-203ENST00000397428 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
SYNE4-203ENST00000397428 GPBP1L1Q9HC44 474 aaPredicted RBP16.41■□□□□ 0.22
SYNE4-203ENST00000397428 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
SYNE4-203ENST00000397428 KDRP35968 1356 aa16.4■□□□□ 0.22
SYNE4-203ENST00000397428 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
SYNE4-203ENST00000397428 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
SYNE4-203ENST00000397428 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
SYNE4-203ENST00000397428 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
SYNE4-203ENST00000397428 ADRA2BP18089 450 aa16.39■□□□□ 0.21
SYNE4-203ENST00000397428 TGFB2P61812 414 aa16.39■□□□□ 0.21
SYNE4-203ENST00000397428 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SYNE4-203ENST00000397428 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
SYNE4-203ENST00000397428 CABP4P57796 275 aa16.38■□□□□ 0.21
SYNE4-203ENST00000397428 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
SYNE4-203ENST00000397428 GYS1P13807 737 aa16.37■□□□□ 0.21
SYNE4-203ENST00000397428 MTHFSP49914 203 aa16.37■□□□□ 0.21
SYNE4-203ENST00000397428 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-203ENST00000397428 WWC3Q9ULE0 1092 aa16.37■□□□□ 0.21
SYNE4-203ENST00000397428 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
SYNE4-203ENST00000397428 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
SYNE4-203ENST00000397428 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
SYNE4-203ENST00000397428 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
SYNE4-203ENST00000397428 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
SYNE4-203ENST00000397428 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
SYNE4-203ENST00000397428 IL13P35225 146 aa16.35■□□□□ 0.21
SYNE4-203ENST00000397428 RFC4P35249 363 aa16.35■□□□□ 0.21
SYNE4-203ENST00000397428 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-203ENST00000397428 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
SYNE4-203ENST00000397428 KCNA3P22001 575 aa16.34■□□□□ 0.21
SYNE4-203ENST00000397428 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
SYNE4-203ENST00000397428 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
SYNE4-203ENST00000397428 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.21
SYNE4-203ENST00000397428 KIF3CO14782 793 aa16.33■□□□□ 0.2
SYNE4-203ENST00000397428 HSPA6P17066 643 aa16.33■□□□□ 0.2
SYNE4-203ENST00000397428 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
SYNE4-203ENST00000397428 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
SYNE4-203ENST00000397428 DPEP1P16444 411 aa16.32■□□□□ 0.2
SYNE4-203ENST00000397428 MYH14Q7Z406 1995 aaKnown RBP16.32■□□□□ 0.2
SYNE4-203ENST00000397428 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
SYNE4-203ENST00000397428 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
SYNE4-203ENST00000397428 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
SYNE4-203ENST00000397428 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
SYNE4-203ENST00000397428 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
SYNE4-203ENST00000397428 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
SYNE4-203ENST00000397428 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
SYNE4-203ENST00000397428 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
SYNE4-203ENST00000397428 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
SYNE4-203ENST00000397428 N4BP2Q86UW6 1770 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-203ENST00000397428 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
SYNE4-203ENST00000397428 TM4SF1P30408 202 aa16.29■□□□□ 0.2
SYNE4-203ENST00000397428 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
SYNE4-203ENST00000397428 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-203ENST00000397428 FKBP8Q14318 412 aa16.28■□□□□ 0.2
SYNE4-203ENST00000397428 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
SYNE4-203ENST00000397428 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
SYNE4-203ENST00000397428 FCHSD2O94868 740 aa16.27■□□□□ 0.2
SYNE4-203ENST00000397428 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
SYNE4-203ENST00000397428 PIM2Q9P1W9 311 aa16.27■□□□□ 0.2
SYNE4-203ENST00000397428 SRP68Q9UHB9 627 aaKnown RBP16.27■□□□□ 0.2
SYNE4-203ENST00000397428 DDR1Q08345 913 aa16.26■□□□□ 0.19
SYNE4-203ENST00000397428 SLC52A2Q9HAB3 445 aa16.26■□□□□ 0.19
SYNE4-203ENST00000397428 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
SYNE4-203ENST00000397428 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
SYNE4-203ENST00000397428 TOMM70O94826 608 aa16.25■□□□□ 0.19
SYNE4-203ENST00000397428 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
SYNE4-203ENST00000397428 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
SYNE4-203ENST00000397428 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
SYNE4-203ENST00000397428 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
SYNE4-203ENST00000397428 TJP1Q07157 1748 aa16.24■□□□□ 0.19
SYNE4-203ENST00000397428 POLRMTO00411 1230 aaKnown RBP16.23■□□□□ 0.19
SYNE4-203ENST00000397428 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
SYNE4-203ENST00000397428 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
SYNE4-203ENST00000397428 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
SYNE4-203ENST00000397428 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
SYNE4-203ENST00000397428 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
SYNE4-203ENST00000397428 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
SYNE4-203ENST00000397428 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
SYNE4-203ENST00000397428 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
SYNE4-203ENST00000397428 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-203ENST00000397428 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 ZPR1O75312 459 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 HMOX1P09601 288 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 APLP1P51693 650 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 VSIG10Q8N0Z9 540 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 NARFQ9UHQ1 456 aa16.21■□□□□ 0.19
SYNE4-203ENST00000397428 ARFGEF1Q9Y6D6 1849 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms