RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CASZ1Q86V15 1759 aa22.13■■□□□ 1.13
TSPAN4-205ENST00000397406 IL16Q14005 1332 aa22.13■■□□□ 1.13
TSPAN4-205ENST00000397406 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-205ENST00000397406 PRIM1P49642 420 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-205ENST00000397406 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-205ENST00000397406 SCN11AQ9UI33 1791 aa22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 PAPPAQ13219 1627 aa22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 GNAT3A8MTJ3 354 aa22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 E9PSI1 815 aa22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 THUMPD2Q9BTF0 503 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-205ENST00000397406 DCTN1Q14203 1278 aa22.11■■□□□ 1.13
TSPAN4-205ENST00000397406 SLC15A2Q16348 729 aa22.11■■□□□ 1.13
TSPAN4-205ENST00000397406 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
TSPAN4-205ENST00000397406 SPG7Q9UQ90 795 aa22.11■■□□□ 1.13
TSPAN4-205ENST00000397406 MCM10Q7L590 875 aa22.1■■□□□ 1.13
TSPAN4-205ENST00000397406 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
TSPAN4-205ENST00000397406 SIPA1L3O60292 1781 aaPredicted RBP22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 CYP27B1O15528 508 aa22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 KCNQ4P56696 695 aa22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 C1orf141Q5JVX7 400 aa22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
TSPAN4-205ENST00000397406 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
TSPAN4-205ENST00000397406 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
TSPAN4-205ENST00000397406 PHKG2P15735 406 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 SPON1Q9HCB6 807 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 STK32BQ9NY57 414 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 ZNF853P0CG23 659 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 PTGER2P43116 358 aa22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-205ENST00000397406 IFNL2Q8IZJ0 200 aa22.05■■□□□ 1.12
TSPAN4-205ENST00000397406 IFT57Q9NWB7 429 aa22.05■■□□□ 1.12
TSPAN4-205ENST00000397406 PCDH11XQ9BZA7 1347 aa22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 PCDH11YQ9BZA8 1340 aa22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 KDM6AO15550 1401 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 AKT1S1Q96B36 256 aa22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 MYH16Q9H6N6 1097 aa22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 LGR6Q9HBX8 967 aa22.04■■□□□ 1.12
TSPAN4-205ENST00000397406 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
TSPAN4-205ENST00000397406 CFAP44Q96MT7 982 aa22.03■■□□□ 1.12
TSPAN4-205ENST00000397406 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 GNAI1P63096 354 aa22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 ATF5Q9Y2D1 282 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 KDM3BQ7LBC6 1761 aa22.02■■□□□ 1.12
TSPAN4-205ENST00000397406 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
TSPAN4-205ENST00000397406 MRC1P22897 1456 aa22■■□□□ 1.11
TSPAN4-205ENST00000397406 LAS1LQ9Y4W2 734 aaKnown RBP22■■□□□ 1.11
TSPAN4-205ENST00000397406 CHL1O00533 1208 aa21.99■■□□□ 1.11
TSPAN4-205ENST00000397406 SLC27A3Q5K4L6 730 aa21.99■■□□□ 1.11
TSPAN4-205ENST00000397406 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-205ENST00000397406 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-205ENST00000397406 MBIPQ9NS73 344 aa21.98■■□□□ 1.11
TSPAN4-205ENST00000397406 LY75O60449 1722 aa21.98■■□□□ 1.11
TSPAN4-205ENST00000397406 DCAF5Q96JK2 942 aa21.97■■□□□ 1.11
TSPAN4-205ENST00000397406 KAT6BQ8WYB5 2073 aa21.96■■□□□ 1.11
TSPAN4-205ENST00000397406 TAF7Q15545 349 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-205ENST00000397406 BABAM1Q9NWV8 329 aa21.96■■□□□ 1.11
TSPAN4-205ENST00000397406 PNPLA7Q6ZV29 1317 aa21.95■■□□□ 1.11
TSPAN4-205ENST00000397406 ITGB4P16144 1822 aa21.95■■□□□ 1.1
TSPAN4-205ENST00000397406 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-205ENST00000397406 TEFQ10587 303 aa21.94■■□□□ 1.1
TSPAN4-205ENST00000397406 PIGBQ92521 554 aa21.94■■□□□ 1.1
TSPAN4-205ENST00000397406 MTFR1LQ9H019 292 aa21.94■■□□□ 1.1
TSPAN4-205ENST00000397406 MIS18AQ9NYP9 233 aa21.93■■□□□ 1.1
TSPAN4-205ENST00000397406 PPP1R1BQ9UD71 204 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-205ENST00000397406 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
TSPAN4-205ENST00000397406 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-205ENST00000397406 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
TSPAN4-205ENST00000397406 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
TSPAN4-205ENST00000397406 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
TSPAN4-205ENST00000397406 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
TSPAN4-205ENST00000397406 ERVV-2B6SEH9 535 aa21.89■■□□□ 1.1
TSPAN4-205ENST00000397406 CT47B1P0C2W7 299 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-205ENST00000397406 AMIGO3Q86WK7 504 aa21.89■■□□□ 1.1
TSPAN4-205ENST00000397406 BTBD11A6QL63 1104 aa21.88■■□□□ 1.09
TSPAN4-205ENST00000397406 C8orf58Q8NAV2 365 aa21.88■■□□□ 1.09
TSPAN4-205ENST00000397406 NFATC2IPQ8NCF5 419 aa21.88■■□□□ 1.09
TSPAN4-205ENST00000397406 TFCP2L1Q9NZI6 479 aa21.88■■□□□ 1.09
TSPAN4-205ENST00000397406 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-205ENST00000397406 UBR2Q8IWV8 1755 aa21.87■■□□□ 1.09
TSPAN4-205ENST00000397406 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
TSPAN4-205ENST00000397406 FHDC1Q9C0D6 1143 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-205ENST00000397406 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 RNF123Q5XPI4 1314 aa21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 CABP4P57796 275 aa21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 KRT24Q2M2I5 525 aa21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 ASAP1Q9ULH1 1129 aa21.86■■□□□ 1.09
TSPAN4-205ENST00000397406 SMIM5Q71RC9 77 aa21.85■■□□□ 1.09
TSPAN4-205ENST00000397406 SYT17Q9BSW7 474 aa21.85■■□□□ 1.09
TSPAN4-205ENST00000397406 KCNQ3O43525 872 aa21.84■■□□□ 1.09
TSPAN4-205ENST00000397406 VAMP4O75379 141 aa21.84■■□□□ 1.09
TSPAN4-205ENST00000397406 TWISTNBQ3B726 338 aaPredicted RBP21.84■■□□□ 1.09
TSPAN4-205ENST00000397406 RARSP54136 660 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms