RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KDM3BQ7LBC6 1761 aa24.44■■□□□ 1.5
TSPAN4-204ENST00000397404 BTBD11A6QL63 1104 aa24.44■■□□□ 1.5
TSPAN4-204ENST00000397404 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
TSPAN4-204ENST00000397404 IPO8O15397 1037 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-204ENST00000397404 PDE3AQ14432 1141 aa24.43■■□□□ 1.5
TSPAN4-204ENST00000397404 SHANK3Q9BYB0 1731 aa24.43■■□□□ 1.5
TSPAN4-204ENST00000397404 FKBP8Q14318 412 aa24.42■■□□□ 1.5
TSPAN4-204ENST00000397404 USP21Q9UK80 565 aa24.42■■□□□ 1.5
TSPAN4-204ENST00000397404 SMC4Q9NTJ3 1288 aa24.4■■□□□ 1.5
TSPAN4-204ENST00000397404 CANXP27824 592 aaKnown RBP24.39■■□□□ 1.5
TSPAN4-204ENST00000397404 ARHGAP45Q92619 1136 aa24.39■■□□□ 1.5
TSPAN4-204ENST00000397404 AAMPQ13685 434 aa24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 DDB1Q16531 1140 aa24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 CABP4P57796 275 aa24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
TSPAN4-204ENST00000397404 BCAR3O75815 825 aa24.37■■□□□ 1.49
TSPAN4-204ENST00000397404 CACNA1FO60840 1977 aa24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 EIF4A1P60842 406 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 CCDC30Q5VVM6 783 aa24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 ZKSCAN2Q63HK3 967 aa24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 DDX54Q8TDD1 881 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-204ENST00000397404 FBXO41Q8TF61 875 aa24.35■■□□□ 1.49
TSPAN4-204ENST00000397404 HEG1Q9ULI3 1381 aa24.34■■□□□ 1.49
TSPAN4-204ENST00000397404 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
TSPAN4-204ENST00000397404 TTC5Q8N0Z6 440 aa24.34■■□□□ 1.49
TSPAN4-204ENST00000397404 TSPYL6Q8N831 410 aa24.34■■□□□ 1.49
TSPAN4-204ENST00000397404 AFF2P51816 1311 aa24.34■■□□□ 1.49
TSPAN4-204ENST00000397404 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.49
TSPAN4-204ENST00000397404 MIS18AQ9NYP9 233 aa24.33■■□□□ 1.49
TSPAN4-204ENST00000397404 ATRNO75882 1429 aa24.33■■□□□ 1.49
TSPAN4-204ENST00000397404 STK31Q9BXU1 1019 aa24.32■■□□□ 1.48
TSPAN4-204ENST00000397404 PTPRCP08575 1304 aa24.31■■□□□ 1.48
TSPAN4-204ENST00000397404 ATF7IPQ6VMQ6 1270 aa24.31■■□□□ 1.48
TSPAN4-204ENST00000397404 MRPL50Q8N5N7 158 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-204ENST00000397404 GJD4Q96KN9 370 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-204ENST00000397404 CHMP4BQ9H444 224 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-204ENST00000397404 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-204ENST00000397404 FMNL2Q96PY5 1086 aa24.29■■□□□ 1.48
TSPAN4-204ENST00000397404 API5Q9BZZ5 524 aaKnown RBP24.29■■□□□ 1.48
TSPAN4-204ENST00000397404 PPP4R2Q9NY27 417 aa24.29■■□□□ 1.48
TSPAN4-204ENST00000397404 TMOD3Q9NYL9 352 aa24.29■■□□□ 1.48
TSPAN4-204ENST00000397404 ONECUT3O60422 494 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-204ENST00000397404 FRAT1Q92837 279 aaPredicted RBP24.28■■□□□ 1.48
TSPAN4-204ENST00000397404 THSD7AQ9UPZ6 1657 aa24.28■■□□□ 1.48
TSPAN4-204ENST00000397404 ZNF772Q68DY9 489 aaPredicted RBP24.27■■□□□ 1.48
TSPAN4-204ENST00000397404 FTSJ3Q8IY81 847 aaKnown RBP24.27■■□□□ 1.48
TSPAN4-204ENST00000397404 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
TSPAN4-204ENST00000397404 PLIN1O60240 522 aa24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 GIGYF1O75420 1035 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 DZIP1LQ8IYY4 767 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 BCL9O00512 1426 aa24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 BCL2L13Q9BXK5 485 aa24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 NOB1Q9ULX3 412 aaKnown RBP24.26■■□□□ 1.47
TSPAN4-204ENST00000397404 SNRPA1P09661 255 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-204ENST00000397404 FAM98CQ17RN3 349 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-204ENST00000397404 UBR2Q8IWV8 1755 aa24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 TOGARAM1Q9Y4F4 1720 aa24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 VSIG10Q8N0Z9 540 aa24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 GLI3P10071 1580 aa24.23■■□□□ 1.47
TSPAN4-204ENST00000397404 ERBB4Q15303 1308 aa24.22■■□□□ 1.47
TSPAN4-204ENST00000397404 SLC4A2P04920 1241 aa24.22■■□□□ 1.47
TSPAN4-204ENST00000397404 TRIM27P14373 513 aa24.22■■□□□ 1.47
TSPAN4-204ENST00000397404 IRX6P78412 446 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-204ENST00000397404 DBF4Q9UBU7 674 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-204ENST00000397404 QTRT2Q9H974 415 aaKnown RBP24.2■■□□□ 1.47
TSPAN4-204ENST00000397404 DDX19BQ9UMR2 479 aa24.2■■□□□ 1.47
TSPAN4-204ENST00000397404 ITGB4P16144 1822 aa24.2■■□□□ 1.46
TSPAN4-204ENST00000397404 MARCH10Q8NA82 808 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-204ENST00000397404 KCNQ3O43525 872 aa24.19■■□□□ 1.46
TSPAN4-204ENST00000397404 ZNF496Q96IT1 587 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-204ENST00000397404 ABCC4O15439 1325 aa24.18■■□□□ 1.46
TSPAN4-204ENST00000397404 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
TSPAN4-204ENST00000397404 MVPQ14764 893 aaKnown RBP24.18■■□□□ 1.46
TSPAN4-204ENST00000397404 CRBNQ96SW2 442 aa24.18■■□□□ 1.46
TSPAN4-204ENST00000397404 HYPKQ9NX55 129 aa24.18■■□□□ 1.46
TSPAN4-204ENST00000397404 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
TSPAN4-204ENST00000397404 C20orf194Q5TEA3 1177 aa24.17■■□□□ 1.46
TSPAN4-204ENST00000397404 PIGBQ92521 554 aa24.17■■□□□ 1.46
TSPAN4-204ENST00000397404 KCPQ6ZWJ8 1503 aa24.17■■□□□ 1.46
TSPAN4-204ENST00000397404 DOT1LQ8TEK3 1739 aa24.16■■□□□ 1.46
TSPAN4-204ENST00000397404 EXOC6Q8TAG9 804 aa24.16■■□□□ 1.46
TSPAN4-204ENST00000397404 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-204ENST00000397404 A0A0G2JS52 829 aa24.14■■□□□ 1.46
TSPAN4-204ENST00000397404 MYT1Q01538 1121 aa24.14■■□□□ 1.46
TSPAN4-204ENST00000397404 FLIIQ13045 1269 aa24.14■■□□□ 1.46
TSPAN4-204ENST00000397404 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.46
TSPAN4-204ENST00000397404 PXDNLA1KZ92 1463 aa24.14■■□□□ 1.46
TSPAN4-204ENST00000397404 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-204ENST00000397404 RBM6P78332 1123 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-204ENST00000397404 PANK1Q8TE04 598 aa24.13■■□□□ 1.45
TSPAN4-204ENST00000397404 PRIM1P49642 420 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-204ENST00000397404 INTS3Q68E01 1043 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-204ENST00000397404 DDX58O95786 925 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-204ENST00000397404 HMGB2P26583 209 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms