RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 VAMP4O75379 141 aa16.34■□□□□ 0.21
LMCD1-202ENST00000397386 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
LMCD1-202ENST00000397386 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
LMCD1-202ENST00000397386 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
LMCD1-202ENST00000397386 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
LMCD1-202ENST00000397386 NEFLP07196 543 aa16.33■□□□□ 0.2
LMCD1-202ENST00000397386 CABP4P57796 275 aa16.33■□□□□ 0.2
LMCD1-202ENST00000397386 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.2
LMCD1-202ENST00000397386 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.2
LMCD1-202ENST00000397386 MIS18AQ9NYP9 233 aa16.33■□□□□ 0.2
LMCD1-202ENST00000397386 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
LMCD1-202ENST00000397386 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
LMCD1-202ENST00000397386 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
LMCD1-202ENST00000397386 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
LMCD1-202ENST00000397386 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
LMCD1-202ENST00000397386 THSD7AQ9UPZ6 1657 aa16.32■□□□□ 0.2
LMCD1-202ENST00000397386 HOXB7P09629 217 aa16.31■□□□□ 0.2
LMCD1-202ENST00000397386 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
LMCD1-202ENST00000397386 GLI3P10071 1580 aa16.31■□□□□ 0.2
LMCD1-202ENST00000397386 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
LMCD1-202ENST00000397386 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
LMCD1-202ENST00000397386 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
LMCD1-202ENST00000397386 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
LMCD1-202ENST00000397386 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
LMCD1-202ENST00000397386 BCAR3O75815 825 aa16.29■□□□□ 0.2
LMCD1-202ENST00000397386 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
LMCD1-202ENST00000397386 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
LMCD1-202ENST00000397386 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
LMCD1-202ENST00000397386 MARCH10Q8NA82 808 aaPredicted RBP16.28■□□□□ 0.2
LMCD1-202ENST00000397386 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.2
LMCD1-202ENST00000397386 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
LMCD1-202ENST00000397386 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.2
LMCD1-202ENST00000397386 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
LMCD1-202ENST00000397386 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.2
LMCD1-202ENST00000397386 KIF16BQ96L93 1317 aa16.27■□□□□ 0.19
LMCD1-202ENST00000397386 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
LMCD1-202ENST00000397386 BCL9O00512 1426 aa16.26■□□□□ 0.19
LMCD1-202ENST00000397386 KCNQ3O43525 872 aa16.25■□□□□ 0.19
LMCD1-202ENST00000397386 GIGYF1O75420 1035 aaPredicted RBP16.24■□□□□ 0.19
LMCD1-202ENST00000397386 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 CCDC30Q5VVM6 783 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 PAPPAQ13219 1627 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
LMCD1-202ENST00000397386 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
LMCD1-202ENST00000397386 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
LMCD1-202ENST00000397386 ITGB4P16144 1822 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 A0A0G2JS52 829 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 MS4A1P11836 297 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
LMCD1-202ENST00000397386 MYT1Q01538 1121 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 SLC39A6Q13433 755 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 FKBP8Q14318 412 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 ZKSCAN2Q63HK3 967 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 PIGBQ92521 554 aa16.23■□□□□ 0.19
LMCD1-202ENST00000397386 UBR2Q8IWV8 1755 aa16.22■□□□□ 0.19
LMCD1-202ENST00000397386 PLIN1O60240 522 aa16.22■□□□□ 0.19
LMCD1-202ENST00000397386 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
LMCD1-202ENST00000397386 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
LMCD1-202ENST00000397386 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
LMCD1-202ENST00000397386 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
LMCD1-202ENST00000397386 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
LMCD1-202ENST00000397386 HDGFL1Q5TGJ6 251 aa16.21■□□□□ 0.19
LMCD1-202ENST00000397386 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
LMCD1-202ENST00000397386 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
LMCD1-202ENST00000397386 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
LMCD1-202ENST00000397386 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
LMCD1-202ENST00000397386 PRIM1P49642 420 aaKnown RBP16.19■□□□□ 0.18
LMCD1-202ENST00000397386 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
LMCD1-202ENST00000397386 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
LMCD1-202ENST00000397386 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
LMCD1-202ENST00000397386 PTPRCP08575 1304 aa16.19■□□□□ 0.18
LMCD1-202ENST00000397386 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
LMCD1-202ENST00000397386 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
LMCD1-202ENST00000397386 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
LMCD1-202ENST00000397386 TRIM27P14373 513 aa16.17■□□□□ 0.18
LMCD1-202ENST00000397386 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
LMCD1-202ENST00000397386 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
LMCD1-202ENST00000397386 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
LMCD1-202ENST00000397386 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
LMCD1-202ENST00000397386 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
LMCD1-202ENST00000397386 RXRBP28702 533 aa16.16■□□□□ 0.18
LMCD1-202ENST00000397386 C20orf194Q5TEA3 1177 aa16.16■□□□□ 0.18
LMCD1-202ENST00000397386 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
LMCD1-202ENST00000397386 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
LMCD1-202ENST00000397386 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
LMCD1-202ENST00000397386 TCERG1O14776 1098 aaKnown RBP16.15■□□□□ 0.18
LMCD1-202ENST00000397386 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
LMCD1-202ENST00000397386 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
LMCD1-202ENST00000397386 AAMPQ13685 434 aa16.14■□□□□ 0.18
LMCD1-202ENST00000397386 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.18
LMCD1-202ENST00000397386 ACSBG1Q96GR2 724 aa16.14■□□□□ 0.18
LMCD1-202ENST00000397386 RGS17Q9UGC6 210 aaPredicted RBP16.14■□□□□ 0.18
LMCD1-202ENST00000397386 LAMB4A4D0S4 1761 aa16.14■□□□□ 0.17
LMCD1-202ENST00000397386 C5P01031 1676 aa16.14■□□□□ 0.17
LMCD1-202ENST00000397386 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
LMCD1-202ENST00000397386 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
LMCD1-202ENST00000397386 KRT27Q7Z3Y8 459 aa16.14■□□□□ 0.17
LMCD1-202ENST00000397386 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms