RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 PDZRN3Q9UPQ7 1066 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 LAMB2P55268 1798 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 USP42Q9H9J4 1324 aaKnown RBP7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 U2SURPO15042 1029 aaKnown RBP7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 CIZ1Q9ULV3 898 aaPredicted RBP7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 PANK1Q8TE04 598 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 COG6Q9Y2V7 657 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 TJP1Q07157 1748 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 DDIT3P35638 169 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
RAPGEF4-203ENST00000397087 ISY1Q9ULR0 285 aaKnown RBP7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 NWD2Q9ULI1 1742 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 UTYO14607 1347 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 SALL3Q9BXA9 1300 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 ARAP2Q8WZ64 1704 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 CHD1LQ86WJ1 897 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 UPF2Q9HAU5 1272 aaKnown RBP7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 HDAC5Q9UQL6 1122 aa7.54□□□□□ -1.2
RAPGEF4-203ENST00000397087 RRP7AQ9Y3A4 280 aaKnown RBP7.53□□□□□ -1.2
RAPGEF4-203ENST00000397087 NRAPQ86VF7 1730 aa7.53□□□□□ -1.2
RAPGEF4-203ENST00000397087 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
RAPGEF4-203ENST00000397087 GNAT3A8MTJ3 354 aa7.53□□□□□ -1.2
RAPGEF4-203ENST00000397087 MTX1Q13505 466 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 TSR2Q969E8 191 aaKnown RBP7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 PHLPP1O60346 1717 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 AKAP4Q5JQC9 854 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 BCL2L13Q9BXK5 485 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 STAP2Q9UGK3 403 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 TNS2Q63HR2 1409 aa7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 AFDNP55196 1824 aaKnown RBP7.52□□□□□ -1.21
RAPGEF4-203ENST00000397087 CCDC30Q5VVM6 783 aa7.51□□□□□ -1.21
RAPGEF4-203ENST00000397087 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
RAPGEF4-203ENST00000397087 PLEKHG5O94827 1062 aa7.51□□□□□ -1.21
RAPGEF4-203ENST00000397087 EYA1Q99502 592 aa7.51□□□□□ -1.21
RAPGEF4-203ENST00000397087 HMMRO75330 724 aa7.51□□□□□ -1.21
RAPGEF4-203ENST00000397087 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 TOGARAM1Q9Y4F4 1720 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 GNAI3P08754 354 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 LRP5O75197 1615 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 PSME1Q06323 249 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 TAF7Q15545 349 aaPredicted RBP7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 SULT6B1Q6IMI4 303 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 C8orf58Q8NAV2 365 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 MLECQ14165 292 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 ITPRIPQ8IWB1 547 aa7.5□□□□□ -1.21
RAPGEF4-203ENST00000397087 KCPQ6ZWJ8 1503 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 CEP85Q6P2H3 762 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 SNRKQ9NRH2 765 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 ALDH1L1O75891 902 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 NGDNQ8NEJ9 315 aaKnown RBP7.49□□□□□ -1.21
RAPGEF4-203ENST00000397087 JCADQ9P266 1359 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 CDC45O75419 566 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 ANAPC15P60006 121 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 RTF1Q92541 710 aaKnown RBP7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 ZRANB1Q9UGI0 708 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 RRS1Q15050 365 aaKnown RBP7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 CACNB1Q02641 598 aaPredicted RBP7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 HSP90AB2PQ58FF8 381 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 TTC22Q5TAA0 569 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 COL16A1Q07092 1604 aaPredicted RBP7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 BCORQ6W2J9 1755 aa7.48□□□□□ -1.21
RAPGEF4-203ENST00000397087 PDIA4P13667 645 aaKnown RBP7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 PLEKHO1Q53GL0 409 aaPredicted RBP7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 TSPYL6Q8N831 410 aa7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 KIAA1551Q9HCM1 1747 aa7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
RAPGEF4-203ENST00000397087 ATP8B2P98198 1209 aa7.46□□□□□ -1.21
RAPGEF4-203ENST00000397087 HSP90AB4PQ58FF6 505 aa7.46□□□□□ -1.21
RAPGEF4-203ENST00000397087 AMPHP49418 695 aa7.46□□□□□ -1.21
RAPGEF4-203ENST00000397087 SSH3Q8TE77 659 aa7.46□□□□□ -1.21
RAPGEF4-203ENST00000397087 SLKQ9H2G2 1235 aaPredicted RBP7.46□□□□□ -1.21
RAPGEF4-203ENST00000397087 KDM6AO15550 1401 aaPredicted RBP7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 HMOX1P09601 288 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 MCM2P49736 904 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 SLC26A8Q96RN1 970 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 HSP90AB1P08238 724 aaKnown RBP7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 NKX1-1Q15270 411 aaPredicted RBP7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 C22orf23Q9BZE7 217 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 TNNQ9UQP3 1299 aa7.46□□□□□ -1.22
RAPGEF4-203ENST00000397087 ITGB4P16144 1822 aa7.45□□□□□ -1.22
RAPGEF4-203ENST00000397087 NPHP3Q7Z494 1330 aa7.45□□□□□ -1.22
RAPGEF4-203ENST00000397087 DISP2A7MBM2 1401 aa7.45□□□□□ -1.22
RAPGEF4-203ENST00000397087 RGL2O15211 777 aa7.45□□□□□ -1.22
RAPGEF4-203ENST00000397087 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms