RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 APBA3O96018 575 aa27.87■■■□□ 2.05
FXN-202ENST00000396364 BAG6P46379 1132 aa27.87■■■□□ 2.05
FXN-202ENST00000396364 PIGBQ92521 554 aa27.87■■■□□ 2.05
FXN-202ENST00000396364 TRIM35Q9UPQ4 493 aa27.87■■■□□ 2.05
FXN-202ENST00000396364 SIPA1L3O60292 1781 aaPredicted RBP27.86■■■□□ 2.05
FXN-202ENST00000396364 HMGB2P26583 209 aaKnown RBP27.85■■■□□ 2.05
FXN-202ENST00000396364 TAF7Q15545 349 aaPredicted RBP27.85■■■□□ 2.05
FXN-202ENST00000396364 UPF1Q92900 1129 aaKnown RBP eCLIP27.84■■■□□ 2.05
FXN-202ENST00000396364 BTBD11A6QL63 1104 aa27.83■■■□□ 2.05
FXN-202ENST00000396364 TTC5Q8N0Z6 440 aa27.83■■■□□ 2.05
FXN-202ENST00000396364 BABAM1Q9NWV8 329 aa27.83■■■□□ 2.05
FXN-202ENST00000396364 SALL2Q9Y467 1007 aaPredicted RBP27.83■■■□□ 2.05
FXN-202ENST00000396364 RGPD3A6NKT7 1758 aaPredicted RBP27.83■■■□□ 2.05
FXN-202ENST00000396364 RGPD4Q7Z3J3 1758 aa27.83■■■□□ 2.05
FXN-202ENST00000396364 PLSCR1O15162 318 aa27.82■■■□□ 2.04
FXN-202ENST00000396364 WWC1Q8IX03 1113 aa27.82■■■□□ 2.04
FXN-202ENST00000396364 THUMPD2Q9BTF0 503 aaKnown RBP27.81■■■□□ 2.04
FXN-202ENST00000396364 PALLDQ8WX93 1383 aa27.79■■■□□ 2.04
FXN-202ENST00000396364 PTF1AQ7RTS3 328 aa27.79■■■□□ 2.04
FXN-202ENST00000396364 WDR63Q8IWG1 891 aa27.79■■■□□ 2.04
FXN-202ENST00000396364 GNAI1P63096 354 aa27.78■■■□□ 2.04
FXN-202ENST00000396364 HNRNPUQ00839 825 aaKnown RBP eCLIP27.78■■■□□ 2.04
FXN-202ENST00000396364 ATG3Q9NT62 314 aa27.78■■■□□ 2.04
FXN-202ENST00000396364 PAPPAQ13219 1627 aa27.78■■■□□ 2.04
FXN-202ENST00000396364 IL16Q14005 1332 aa27.77■■■□□ 2.04
FXN-202ENST00000396364 SENP3-EIF4A1A0A087X0R7 540 aa27.77■■■□□ 2.04
FXN-202ENST00000396364 ASAP1Q9ULH1 1129 aa27.77■■■□□ 2.04
FXN-202ENST00000396364 ZNF790Q6PG37 636 aa27.76■■■□□ 2.03
FXN-202ENST00000396364 CFAP44Q96MT7 982 aa27.76■■■□□ 2.03
FXN-202ENST00000396364 IFT57Q9NWB7 429 aa27.76■■■□□ 2.03
FXN-202ENST00000396364 TSPYL4Q9UJ04 414 aa27.76■■■□□ 2.03
FXN-202ENST00000396364 LAS1LQ9Y4W2 734 aaKnown RBP27.76■■■□□ 2.03
FXN-202ENST00000396364 LY75O60449 1722 aa27.75■■■□□ 2.03
FXN-202ENST00000396364 SLC27A3Q5K4L6 730 aa27.74■■■□□ 2.03
FXN-202ENST00000396364 KDM3BQ7LBC6 1761 aa27.73■■■□□ 2.03
FXN-202ENST00000396364 EN1Q05925 392 aaPredicted RBP27.72■■■□□ 2.03
FXN-202ENST00000396364 SLC39A6Q13433 755 aa27.72■■■□□ 2.03
FXN-202ENST00000396364 FMNL2Q96PY5 1086 aa27.72■■■□□ 2.03
FXN-202ENST00000396364 RBM42Q9BTD8 480 aaKnown RBP27.72■■■□□ 2.03
FXN-202ENST00000396364 UBR2Q8IWV8 1755 aa27.72■■■□□ 2.03
FXN-202ENST00000396364 CHL1O00533 1208 aa27.71■■■□□ 2.03
FXN-202ENST00000396364 SOCS7O14512 581 aa27.71■■■□□ 2.03
FXN-202ENST00000396364 LOC102724428A0A0B4J2F2 783 aa27.7■■■□□ 2.02
FXN-202ENST00000396364 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.02
FXN-202ENST00000396364 SIK1P57059 783 aa27.7■■■□□ 2.02
FXN-202ENST00000396364 TXNRD1Q16881 649 aa27.7■■■□□ 2.02
FXN-202ENST00000396364 CCNL1Q9UK58 526 aaPredicted RBP27.7■■■□□ 2.02
FXN-202ENST00000396364 ZNF831Q5JPB2 1677 aa27.7■■■□□ 2.02
FXN-202ENST00000396364 GOLGA2Q08379 1002 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 DEFB132Q7Z7B7 95 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 VSIG10Q8N0Z9 540 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 CAMKK2Q96RR4 588 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 MYH16Q9H6N6 1097 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 MIS18AQ9NYP9 233 aa27.69■■■□□ 2.02
FXN-202ENST00000396364 ATP6V1AP38606 617 aa27.68■■■□□ 2.02
FXN-202ENST00000396364 ZNF521Q96K83 1311 aa27.67■■■□□ 2.02
FXN-202ENST00000396364 ZNF853P0CG23 659 aa27.67■■■□□ 2.02
FXN-202ENST00000396364 EZH2Q15910 746 aaKnown RBP27.67■■■□□ 2.02
FXN-202ENST00000396364 TEX13AQ9BXU3 409 aaPredicted RBP27.67■■■□□ 2.02
FXN-202ENST00000396364 KCPQ6ZWJ8 1503 aa27.67■■■□□ 2.02
FXN-202ENST00000396364 HEG1Q9ULI3 1381 aa27.65■■■□□ 2.02
FXN-202ENST00000396364 ZNF496Q96IT1 587 aaPredicted RBP27.65■■■□□ 2.02
FXN-202ENST00000396364 RREB1Q92766 1687 aa27.65■■■□□ 2.02
FXN-202ENST00000396364 ZBED9Q6R2W3 1325 aa27.65■■■□□ 2.02
FXN-202ENST00000396364 E9PSI1 815 aa27.64■■■□□ 2.02
FXN-202ENST00000396364 MBIPQ9NS73 344 aa27.64■■■□□ 2.02
FXN-202ENST00000396364 CICQ96RK0 1608 aaPredicted RBP27.63■■■□□ 2.01
FXN-202ENST00000396364 SNRPA1P09661 255 aaKnown RBP27.63■■■□□ 2.01
FXN-202ENST00000396364 EIF4A1P60842 406 aaKnown RBP27.63■■■□□ 2.01
FXN-202ENST00000396364 KCNQ3O43525 872 aa27.62■■■□□ 2.01
FXN-202ENST00000396364 CHMP4AQ9BY43 222 aa27.62■■■□□ 2.01
FXN-202ENST00000396364 C5P01031 1676 aa27.62■■■□□ 2.01
FXN-202ENST00000396364 STARD3NLO95772 234 aa27.6■■■□□ 2.01
FXN-202ENST00000396364 NBPF14Q5TI25 921 aa27.6■■■□□ 2.01
FXN-202ENST00000396364 TAF1LQ8IZX4 1826 aa27.6■■■□□ 2.01
FXN-202ENST00000396364 PROM2Q8N271 834 aa27.59■■■□□ 2.01
FXN-202ENST00000396364 SOS1Q07889 1333 aaPredicted RBP27.59■■■□□ 2.01
FXN-202ENST00000396364 NUP188Q5SRE5 1749 aa27.58■■■□□ 2.01
FXN-202ENST00000396364 FANCIQ9NVI1 1328 aa27.58■■■□□ 2.01
FXN-202ENST00000396364 HOXB7P09629 217 aa27.57■■■□□ 2
FXN-202ENST00000396364 TSR2Q969E8 191 aaKnown RBP27.57■■■□□ 2
FXN-202ENST00000396364 LRRC4BQ9NT99 713 aa27.57■■■□□ 2
FXN-202ENST00000396364 TJP1Q07157 1748 aa27.57■■■□□ 2
FXN-202ENST00000396364 LAMB4A4D0S4 1761 aa27.56■■■□□ 2
FXN-202ENST00000396364 GIGYF1O75420 1035 aaPredicted RBP27.56■■■□□ 2
FXN-202ENST00000396364 COL5A3P25940 1745 aaPredicted RBP27.55■■■□□ 2
FXN-202ENST00000396364 SLFN5Q08AF3 891 aa27.55■■■□□ 2
FXN-202ENST00000396364 DNAJC10Q8IXB1 793 aa27.55■■■□□ 2
FXN-202ENST00000396364 SLC4A9Q96Q91 983 aa27.55■■■□□ 2
FXN-202ENST00000396364 C4BP0C0L5 1744 aa27.54■■■□□ 2
FXN-202ENST00000396364 ITPK1Q13572 414 aa27.54■■■□□ 2
FXN-202ENST00000396364 AK7Q96M32 723 aa27.54■■■□□ 2
FXN-202ENST00000396364 STK32BQ9NY57 414 aa27.54■■■□□ 2
FXN-202ENST00000396364 KCNQ4P56696 695 aa27.53■■■□□ 2
FXN-202ENST00000396364 YTHDC1Q96MU7 727 aaKnown RBP27.53■■■□□ 2
FXN-202ENST00000396364 CNTNAP4Q9C0A0 1308 aa27.52■■■□□ 2
FXN-202ENST00000396364 RC3H1Q5TC82 1133 aaKnown RBP27.52■■■□□ 2
FXN-202ENST00000396364 LINC00116Q8NCU8 138 aa27.52■■■□□ 2
FXN-202ENST00000396364 DUSP27Q5VZP5 1158 aa27.51■■□□□ 1.99
FXN-202ENST00000396364 NPM2Q86SE8 214 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms