RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
RTFDC1-203ENST00000395881 TNS2Q63HR2 1409 aa18.46■□□□□ 0.54
RTFDC1-203ENST00000395881 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
RTFDC1-203ENST00000395881 TRIM37O94972 964 aa18.45■□□□□ 0.54
RTFDC1-203ENST00000395881 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
RTFDC1-203ENST00000395881 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
RTFDC1-203ENST00000395881 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
RTFDC1-203ENST00000395881 PANK1Q8TE04 598 aa18.44■□□□□ 0.54
RTFDC1-203ENST00000395881 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
RTFDC1-203ENST00000395881 EYA1Q99502 592 aa18.43■□□□□ 0.54
RTFDC1-203ENST00000395881 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
RTFDC1-203ENST00000395881 MEGF6O75095 1541 aa18.43■□□□□ 0.54
RTFDC1-203ENST00000395881 DZIP1LQ8IYY4 767 aaKnown RBP18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 VAMP4O75379 141 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 MVPQ14764 893 aaKnown RBP18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 BCL2L13Q9BXK5 485 aa18.42■□□□□ 0.54
RTFDC1-203ENST00000395881 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
RTFDC1-203ENST00000395881 BCL9O00512 1426 aa18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 CHL1O00533 1208 aa18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 RLBP1P12271 317 aa18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 PTF1AQ7RTS3 328 aa18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 FTSJ3Q8IY81 847 aaKnown RBP18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
RTFDC1-203ENST00000395881 TRIM27P14373 513 aa18.39■□□□□ 0.53
RTFDC1-203ENST00000395881 BAG6P46379 1132 aa18.39■□□□□ 0.53
RTFDC1-203ENST00000395881 KAT6BQ8WYB5 2073 aa18.39■□□□□ 0.53
RTFDC1-203ENST00000395881 EN1Q05925 392 aaPredicted RBP18.38■□□□□ 0.53
RTFDC1-203ENST00000395881 DDX19BQ9UMR2 479 aa18.38■□□□□ 0.53
RTFDC1-203ENST00000395881 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-203ENST00000395881 APBA3O96018 575 aa18.38■□□□□ 0.53
RTFDC1-203ENST00000395881 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-203ENST00000395881 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
RTFDC1-203ENST00000395881 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
RTFDC1-203ENST00000395881 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
RTFDC1-203ENST00000395881 TATP17735 454 aaPredicted RBP18.36■□□□□ 0.53
RTFDC1-203ENST00000395881 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-203ENST00000395881 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
RTFDC1-203ENST00000395881 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-203ENST00000395881 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
RTFDC1-203ENST00000395881 MRPL50Q8N5N7 158 aaKnown RBP18.35■□□□□ 0.53
RTFDC1-203ENST00000395881 CAMKK2Q96RR4 588 aa18.35■□□□□ 0.53
RTFDC1-203ENST00000395881 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
RTFDC1-203ENST00000395881 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
RTFDC1-203ENST00000395881 KCNQ2O43526 872 aa18.34■□□□□ 0.53
RTFDC1-203ENST00000395881 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
RTFDC1-203ENST00000395881 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
RTFDC1-203ENST00000395881 ACSBG1Q96GR2 724 aa18.34■□□□□ 0.53
RTFDC1-203ENST00000395881 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
RTFDC1-203ENST00000395881 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.53
RTFDC1-203ENST00000395881 NHSQ6T4R5 1651 aa18.33■□□□□ 0.53
RTFDC1-203ENST00000395881 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
RTFDC1-203ENST00000395881 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
RTFDC1-203ENST00000395881 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
RTFDC1-203ENST00000395881 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
RTFDC1-203ENST00000395881 GNAT3A8MTJ3 354 aa18.31■□□□□ 0.52
RTFDC1-203ENST00000395881 IGHDP01880 384 aa18.31■□□□□ 0.52
RTFDC1-203ENST00000395881 MCM10Q7L590 875 aa18.31■□□□□ 0.52
RTFDC1-203ENST00000395881 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
RTFDC1-203ENST00000395881 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 RREB1Q92766 1687 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 DOT1LQ8TEK3 1739 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 BTAF1O14981 1849 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 CYP27B1O15528 508 aa18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 API5Q9BZZ5 524 aaKnown RBP18.3■□□□□ 0.52
RTFDC1-203ENST00000395881 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 PLSCR1O15162 318 aa18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 PDE4AP27815 886 aa18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 PLEKHG2Q9H7P9 1386 aa18.29■□□□□ 0.52
RTFDC1-203ENST00000395881 ABCC4O15439 1325 aa18.28■□□□□ 0.52
RTFDC1-203ENST00000395881 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
RTFDC1-203ENST00000395881 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
RTFDC1-203ENST00000395881 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
RTFDC1-203ENST00000395881 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
RTFDC1-203ENST00000395881 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
RTFDC1-203ENST00000395881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■□□□□ 9.7
RTFDC1-203ENST00000395881 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
RTFDC1-203ENST00000395881 PROM2Q8N271 834 aa18.26■□□□□ 0.51
RTFDC1-203ENST00000395881 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
RTFDC1-203ENST00000395881 CACNA1FO60840 1977 aa18.25■□□□□ 0.51
RTFDC1-203ENST00000395881 PTPRCP08575 1304 aa18.25■□□□□ 0.51
RTFDC1-203ENST00000395881 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
RTFDC1-203ENST00000395881 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
RTFDC1-203ENST00000395881 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
RTFDC1-203ENST00000395881 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
RTFDC1-203ENST00000395881 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
RTFDC1-203ENST00000395881 ITGB4P16144 1822 aa18.23■□□□□ 0.51
RTFDC1-203ENST00000395881 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
RTFDC1-203ENST00000395881 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
RTFDC1-203ENST00000395881 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
RTFDC1-203ENST00000395881 SYTL4Q96C24 671 aaPredicted RBP18.22■□□□□ 0.51
RTFDC1-203ENST00000395881 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms