RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 TSC1Q92574 1164 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 BRD4O60885 1362 aaPredicted RBP10.87□□□□□ -0.67
MSH5-205ENST00000395853 PPLO60437 1756 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 ICE2Q659A1 982 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 TECPR2O15040 1411 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 DHX16O60231 1041 aaKnown RBP10.86□□□□□ -0.67
MSH5-205ENST00000395853 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
MSH5-205ENST00000395853 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 JARID2Q92833 1246 aaPredicted RBP10.86□□□□□ -0.67
MSH5-205ENST00000395853 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 KIF1AQ12756 1690 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 GLI3P10071 1580 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 USP19O94966 1318 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 DONSONQ9NYP3 566 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
MSH5-205ENST00000395853 TERF2Q15554 542 aa10.85□□□□□ -0.67
MSH5-205ENST00000395853 SGSM3Q96HU1 749 aa10.85□□□□□ -0.67
MSH5-205ENST00000395853 RCAN3Q9UKA8 241 aa10.85□□□□□ -0.67
MSH5-205ENST00000395853 SSR1P43307 286 aaKnown RBP10.85□□□□□ -0.67
MSH5-205ENST00000395853 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
MSH5-205ENST00000395853 ZNF526Q8TF50 670 aaPredicted RBP10.85□□□□□ -0.67
MSH5-205ENST00000395853 NRXN1Q9ULB1 1477 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
MSH5-205ENST00000395853 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
MSH5-205ENST00000395853 CENPQQ7L2Z9 268 aaPredicted RBP10.84□□□□□ -0.67
MSH5-205ENST00000395853 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 ONECUT3O60422 494 aaPredicted RBP10.84□□□□□ -0.67
MSH5-205ENST00000395853 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
MSH5-205ENST00000395853 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 FOXO3O43524 673 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 KIF1CO43896 1103 aaKnown RBP10.83□□□□□ -0.68
MSH5-205ENST00000395853 NBPF10Q6P3W6 841 aaKnown RBP10.83□□□□□ -0.68
MSH5-205ENST00000395853 TERF2IPQ9NYB0 399 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 NWD2Q9ULI1 1742 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 USP32Q8NFA0 1604 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 ABCC11Q96J66 1382 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 TDO2P48775 406 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 PDLIM2Q96JY6 352 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 RASSF4Q9H2L5 321 aa10.83□□□□□ -0.68
MSH5-205ENST00000395853 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
MSH5-205ENST00000395853 RBM28Q9NW13 759 aaKnown RBP10.83□□□□□ -0.68
MSH5-205ENST00000395853 EIF3AQ14152 1382 aaKnown RBP10.82□□□□□ -0.68
MSH5-205ENST00000395853 MYOM1P52179 1685 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 VPS72Q15906 364 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 FMN2Q9NZ56 1722 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 ZNF853P0CG23 659 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 OTUD6BQ8N6M0 293 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 BRWD3Q6RI45 1802 aa10.82□□□□□ -0.68
MSH5-205ENST00000395853 RAD51AP2Q09MP3 1159 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 TBC1D2Q9BYX2 928 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 TMX1Q9H3N1 280 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 ZBTB12Q9Y330 459 aaPredicted RBP10.81□□□□□ -0.68
MSH5-205ENST00000395853 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
MSH5-205ENST00000395853 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 KNSTRNQ9Y448 316 aa10.81□□□□□ -0.68
MSH5-205ENST00000395853 KIAA2012Q0VF49 1180 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 ANKRD7Q92527 254 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 C14orf93Q9H972 538 aaKnown RBP10.8□□□□□ -0.68
MSH5-205ENST00000395853 CCDC39Q9UFE4 941 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 TRAK1Q9UPV9 953 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 PIK3C2GO75747 1445 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 MAFGO15525 162 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 HSP90AB1P08238 724 aaKnown RBP10.8□□□□□ -0.68
MSH5-205ENST00000395853 PSME1Q06323 249 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 CREBRFQ8IUR6 639 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 SEPT12Q8IYM1 358 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 SBNO1A3KN83 1393 aa10.8□□□□□ -0.68
MSH5-205ENST00000395853 TNS3Q68CZ2 1445 aa10.79□□□□□ -0.68
MSH5-205ENST00000395853 IBTKQ9P2D0 1353 aaPredicted RBP10.79□□□□□ -0.68
MSH5-205ENST00000395853 ZKSCAN8Q15776 578 aaPredicted RBP10.79□□□□□ -0.68
MSH5-205ENST00000395853 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
MSH5-205ENST00000395853 MED4Q9NPJ6 270 aa10.79□□□□□ -0.68
MSH5-205ENST00000395853 FAM177BA6PVY3 158 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 ARID4AP29374 1257 aaPredicted RBP10.78□□□□□ -0.68
MSH5-205ENST00000395853 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
MSH5-205ENST00000395853 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 BAG6P46379 1132 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 DNAJC21Q5F1R6 531 aaKnown RBP10.78□□□□□ -0.68
MSH5-205ENST00000395853 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 TOMM22Q9NS69 142 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
MSH5-205ENST00000395853 CALR3Q96L12 384 aaKnown RBP10.78□□□□□ -0.68
MSH5-205ENST00000395853 TNNT1P13805 278 aa10.77□□□□□ -0.69
MSH5-205ENST00000395853 PPP2R1AP30153 589 aa10.77□□□□□ -0.69
MSH5-205ENST00000395853 SUFUQ9UMX1 484 aa10.77□□□□□ -0.69
MSH5-205ENST00000395853 CRBNQ96SW2 442 aa10.77□□□□□ -0.69
MSH5-205ENST00000395853 RAD50Q92878 1312 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms