RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
PTPN20-206ENST00000395722 C8orf58Q8NAV2 365 aa19.55■□□□□ 0.72
PTPN20-206ENST00000395722 ONECUT3O60422 494 aaPredicted RBP19.54■□□□□ 0.72
PTPN20-206ENST00000395722 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
PTPN20-206ENST00000395722 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
PTPN20-206ENST00000395722 VAMP4O75379 141 aa19.53■□□□□ 0.72
PTPN20-206ENST00000395722 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
PTPN20-206ENST00000395722 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
PTPN20-206ENST00000395722 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.72
PTPN20-206ENST00000395722 TWISTNBQ3B726 338 aaPredicted RBP19.52■□□□□ 0.71
PTPN20-206ENST00000395722 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.71
PTPN20-206ENST00000395722 QTRT2Q9H974 415 aaKnown RBP19.52■□□□□ 0.71
PTPN20-206ENST00000395722 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
PTPN20-206ENST00000395722 PAPPAQ13219 1627 aa19.51■□□□□ 0.71
PTPN20-206ENST00000395722 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
PTPN20-206ENST00000395722 CABP4P57796 275 aa19.51■□□□□ 0.71
PTPN20-206ENST00000395722 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
PTPN20-206ENST00000395722 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
PTPN20-206ENST00000395722 EIF4A1P60842 406 aaKnown RBP19.5■□□□□ 0.71
PTPN20-206ENST00000395722 KCNQ3O43525 872 aa19.5■□□□□ 0.71
PTPN20-206ENST00000395722 ALDH1L2Q3SY69 923 aa19.5■□□□□ 0.71
PTPN20-206ENST00000395722 ZNF772Q68DY9 489 aaPredicted RBP19.5■□□□□ 0.71
PTPN20-206ENST00000395722 ITGB4P16144 1822 aa19.49■□□□□ 0.71
PTPN20-206ENST00000395722 BCAR3O75815 825 aa19.48■□□□□ 0.71
PTPN20-206ENST00000395722 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
PTPN20-206ENST00000395722 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
PTPN20-206ENST00000395722 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
PTPN20-206ENST00000395722 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
PTPN20-206ENST00000395722 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
PTPN20-206ENST00000395722 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
PTPN20-206ENST00000395722 HOXB7P09629 217 aa19.46■□□□□ 0.71
PTPN20-206ENST00000395722 BCL9O00512 1426 aa19.45■□□□□ 0.7
PTPN20-206ENST00000395722 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
PTPN20-206ENST00000395722 TMOD3Q9NYL9 352 aa19.44■□□□□ 0.7
PTPN20-206ENST00000395722 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
PTPN20-206ENST00000395722 KCPQ6ZWJ8 1503 aa19.44■□□□□ 0.7
PTPN20-206ENST00000395722 SEPT12Q8IYM1 358 aa19.43■□□□□ 0.7
PTPN20-206ENST00000395722 PIGBQ92521 554 aa19.43■□□□□ 0.7
PTPN20-206ENST00000395722 RBM6P78332 1123 aaKnown RBP19.43■□□□□ 0.7
PTPN20-206ENST00000395722 MRPL50Q8N5N7 158 aaKnown RBP19.43■□□□□ 0.7
PTPN20-206ENST00000395722 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
PTPN20-206ENST00000395722 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
PTPN20-206ENST00000395722 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
PTPN20-206ENST00000395722 NEFLP07196 543 aa19.42■□□□□ 0.7
PTPN20-206ENST00000395722 PLIN1O60240 522 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 TTC5Q8N0Z6 440 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
PTPN20-206ENST00000395722 A0A0G2JS52 829 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 MYT1Q01538 1121 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 RGS17Q9UGC6 210 aaPredicted RBP19.41■□□□□ 0.7
PTPN20-206ENST00000395722 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 C5P01031 1676 aa19.41■□□□□ 0.7
PTPN20-206ENST00000395722 KIF16BQ96L93 1317 aa19.4■□□□□ 0.7
PTPN20-206ENST00000395722 PRIM1P49642 420 aaKnown RBP19.4■□□□□ 0.7
PTPN20-206ENST00000395722 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
PTPN20-206ENST00000395722 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
PTPN20-206ENST00000395722 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.69
PTPN20-206ENST00000395722 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
PTPN20-206ENST00000395722 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
PTPN20-206ENST00000395722 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
PTPN20-206ENST00000395722 NHSQ6T4R5 1651 aa19.38■□□□□ 0.69
PTPN20-206ENST00000395722 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
PTPN20-206ENST00000395722 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
PTPN20-206ENST00000395722 SNRPA1P09661 255 aaKnown RBP19.37■□□□□ 0.69
PTPN20-206ENST00000395722 FKBP8Q14318 412 aa19.37■□□□□ 0.69
PTPN20-206ENST00000395722 PDE3AQ14432 1141 aa19.37■□□□□ 0.69
PTPN20-206ENST00000395722 HDGFL1Q5TGJ6 251 aa19.37■□□□□ 0.69
PTPN20-206ENST00000395722 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
PTPN20-206ENST00000395722 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
PTPN20-206ENST00000395722 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
PTPN20-206ENST00000395722 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
PTPN20-206ENST00000395722 ARHGAP45Q92619 1136 aa19.36■□□□□ 0.69
PTPN20-206ENST00000395722 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
PTPN20-206ENST00000395722 PRAMEF22A3QJZ6 481 aa19.35■□□□□ 0.69
PTPN20-206ENST00000395722 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
PTPN20-206ENST00000395722 ACSBG1Q96GR2 724 aa19.35■□□□□ 0.69
PTPN20-206ENST00000395722 KAT6BQ8WYB5 2073 aa19.35■□□□□ 0.69
PTPN20-206ENST00000395722 SBF2Q86WG5 1849 aa19.35■□□□□ 0.69
PTPN20-206ENST00000395722 ERICH6BQ5W0A0 696 aa19.35■□□□□ 0.69
PTPN20-206ENST00000395722 IPO8O15397 1037 aaKnown RBP19.34■□□□□ 0.69
PTPN20-206ENST00000395722 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
PTPN20-206ENST00000395722 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
PTPN20-206ENST00000395722 STK31Q9BXU1 1019 aa19.34■□□□□ 0.69
PTPN20-206ENST00000395722 SLC4A2P04920 1241 aa19.33■□□□□ 0.69
PTPN20-206ENST00000395722 RXRBP28702 533 aa19.33■□□□□ 0.69
PTPN20-206ENST00000395722 VSIG10Q8N0Z9 540 aa19.33■□□□□ 0.69
PTPN20-206ENST00000395722 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.68
PTPN20-206ENST00000395722 KCNQ2O43526 872 aa19.33■□□□□ 0.68
PTPN20-206ENST00000395722 TRIM27P14373 513 aa19.33■□□□□ 0.68
PTPN20-206ENST00000395722 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
PTPN20-206ENST00000395722 POTEAQ6S8J7 498 aa19.33■□□□□ 0.68
PTPN20-206ENST00000395722 EIF2S2P20042 333 aaKnown RBP19.32■□□□□ 0.68
PTPN20-206ENST00000395722 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
PTPN20-206ENST00000395722 RGS12O14924 1447 aa19.32■□□□□ 0.68
PTPN20-206ENST00000395722 MS4A1P11836 297 aa19.32■□□□□ 0.68
PTPN20-206ENST00000395722 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
PTPN20-206ENST00000395722 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
PTPN20-206ENST00000395722 PTPRCP08575 1304 aa19.31■□□□□ 0.68
PTPN20-206ENST00000395722 PTCD1O75127 700 aaKnown RBP19.31■□□□□ 0.68
PTPN20-206ENST00000395722 CHPF2Q9P2E5 772 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms