RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
CDRT1-203ENST00000395667 TSHZ3Q63HK5 1081 aa11.36□□□□□ -0.59
CDRT1-203ENST00000395667 SOS1Q07889 1333 aaPredicted RBP11.36□□□□□ -0.59
CDRT1-203ENST00000395667 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 ST18O60284 1047 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDRT1-203ENST00000395667 SSFA2P28290 1259 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 PSME1Q06323 249 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 LRRFIP2Q9Y608 721 aaKnown RBP11.35□□□□□ -0.59
CDRT1-203ENST00000395667 FSD2A1L4K1 749 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 PTMSP20962 102 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
CDRT1-203ENST00000395667 EIF2S2P20042 333 aaKnown RBP11.35□□□□□ -0.59
CDRT1-203ENST00000395667 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
CDRT1-203ENST00000395667 ESCO1Q5FWF5 840 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 IP6K1Q92551 441 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 NWD1Q149M9 1564 aa11.35□□□□□ -0.59
CDRT1-203ENST00000395667 SKOR2Q2VWA4 1001 aaPredicted RBP11.34□□□□□ -0.59
CDRT1-203ENST00000395667 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
CDRT1-203ENST00000395667 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
CDRT1-203ENST00000395667 MX1P20591 662 aa11.34□□□□□ -0.59
CDRT1-203ENST00000395667 CACNA1FO60840 1977 aa11.34□□□□□ -0.59
CDRT1-203ENST00000395667 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 PHAXQ9H814 394 aaKnown RBP11.33□□□□□ -0.6
CDRT1-203ENST00000395667 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
CDRT1-203ENST00000395667 NBPF6Q5VWK0 638 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 FAM43AQ8N2R8 423 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 NBPF4Q96M43 638 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 MARF1Q9Y4F3 1742 aaKnown RBP11.33□□□□□ -0.6
CDRT1-203ENST00000395667 MRE11P49959 708 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
CDRT1-203ENST00000395667 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
CDRT1-203ENST00000395667 AK9Q5TCS8 1911 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 NUCB2P80303 420 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 TEFQ10587 303 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
CDRT1-203ENST00000395667 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 KCNH5Q8NCM2 988 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 LTN1O94822 1766 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 MCCP23508 829 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 ZNF530Q6P9A1 599 aaPredicted RBP11.31□□□□□ -0.6
CDRT1-203ENST00000395667 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
CDRT1-203ENST00000395667 BAG4O95429 457 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 ANO2Q9NQ90 1003 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 ISY1Q9ULR0 285 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 USP54Q70EL1 1684 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 NEK4P51957 841 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
CDRT1-203ENST00000395667 CEMIPQ8WUJ3 1361 aa11.3□□□□□ -0.6
CDRT1-203ENST00000395667 BTBD11A6QL63 1104 aa11.29□□□□□ -0.6
CDRT1-203ENST00000395667 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
CDRT1-203ENST00000395667 CHMLP26374 656 aa11.29□□□□□ -0.6
CDRT1-203ENST00000395667 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
CDRT1-203ENST00000395667 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
CDRT1-203ENST00000395667 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
CDRT1-203ENST00000395667 PI4KAP2A4QPH2 592 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 KCNQ3O43525 872 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 ANXA1P04083 346 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 PI4KAP1Q8N8J0 262 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 DNAAF4Q8WXU2 420 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
CDRT1-203ENST00000395667 HOXB7P09629 217 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
CDRT1-203ENST00000395667 RAB11FIP3O75154 756 aa11.27□□□□□ -0.6
CDRT1-203ENST00000395667 PKP1Q13835 747 aa11.27□□□□□ -0.6
CDRT1-203ENST00000395667 NFAT5O94916 1531 aa11.27□□□□□ -0.6
CDRT1-203ENST00000395667 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
CDRT1-203ENST00000395667 NBPF7P0C2Y1 421 aaPredicted RBP11.27□□□□□ -0.61
CDRT1-203ENST00000395667 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
CDRT1-203ENST00000395667 GCP02774 474 aa11.27□□□□□ -0.61
CDRT1-203ENST00000395667 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
CDRT1-203ENST00000395667 ORAI2Q96SN7 254 aa11.27□□□□□ -0.61
CDRT1-203ENST00000395667 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
CDRT1-203ENST00000395667 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms