RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
SNCAIP-204ENST00000395466 KIF2CQ99661 725 aa17.26■□□□□ 0.35
SNCAIP-204ENST00000395466 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
SNCAIP-204ENST00000395466 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
SNCAIP-204ENST00000395466 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
SNCAIP-204ENST00000395466 PXDNQ92626 1479 aa17.25■□□□□ 0.35
SNCAIP-204ENST00000395466 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 HMMRO75330 724 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 GNAI2P04899 355 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 KRT28Q7Z3Y7 464 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 SNX21Q969T3 373 aa17.24■□□□□ 0.35
SNCAIP-204ENST00000395466 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
SNCAIP-204ENST00000395466 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
SNCAIP-204ENST00000395466 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
SNCAIP-204ENST00000395466 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 HDGFL1Q5TGJ6 251 aa17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 GNAI3P08754 354 aa17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
SNCAIP-204ENST00000395466 HOXB7P09629 217 aa17.21■□□□□ 0.35
SNCAIP-204ENST00000395466 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
SNCAIP-204ENST00000395466 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.35
SNCAIP-204ENST00000395466 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
SNCAIP-204ENST00000395466 KCNQ3O43525 872 aa17.2■□□□□ 0.34
SNCAIP-204ENST00000395466 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-204ENST00000395466 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
SNCAIP-204ENST00000395466 HSCBQ8IWL3 235 aa17.2■□□□□ 0.34
SNCAIP-204ENST00000395466 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 APBB1O00213 710 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 GSE1Q14687 1217 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 LMOD2Q6P5Q4 547 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
SNCAIP-204ENST00000395466 COL18A1P39060 1754 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 SDSP20132 328 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 SPRYD3Q8NCJ5 442 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 SALL3Q9BXA9 1300 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 DCCP43146 1447 aa17.18■□□□□ 0.34
SNCAIP-204ENST00000395466 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 DDIT3P35638 169 aa17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 TEFQ10587 303 aa17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
SNCAIP-204ENST00000395466 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 PDE1AP54750 535 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 ERBB3P21860 1342 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
SNCAIP-204ENST00000395466 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-204ENST00000395466 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
SNCAIP-204ENST00000395466 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.34
SNCAIP-204ENST00000395466 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
SNCAIP-204ENST00000395466 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-204ENST00000395466 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
SNCAIP-204ENST00000395466 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
SNCAIP-204ENST00000395466 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
SNCAIP-204ENST00000395466 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-204ENST00000395466 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
SNCAIP-204ENST00000395466 ADCY9O60503 1353 aa17.13■□□□□ 0.33
SNCAIP-204ENST00000395466 ATF3P18847 181 aa17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 ABCC6O95255 1503 aa17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-204ENST00000395466 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
SNCAIP-204ENST00000395466 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-204ENST00000395466 ANXA1P04083 346 aa17.11■□□□□ 0.33
SNCAIP-204ENST00000395466 POLA2Q14181 598 aa17.11■□□□□ 0.33
SNCAIP-204ENST00000395466 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
SNCAIP-204ENST00000395466 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-204ENST00000395466 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
SNCAIP-204ENST00000395466 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 MCM4P33991 863 aa17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 C5P01031 1676 aa17.09■□□□□ 0.33
SNCAIP-204ENST00000395466 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 MX1P20591 662 aa17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 RABEP1Q15276 862 aa17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 PROSER3Q2NL68 480 aa17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 TSHZ3Q63HK5 1081 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms