RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
HLA-DMA-202ENST00000395303 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
HLA-DMA-202ENST00000395303 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
HLA-DMA-202ENST00000395303 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
HLA-DMA-202ENST00000395303 HMGB2P26583 209 aaKnown RBP17.89■□□□□ 0.45
HLA-DMA-202ENST00000395303 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-202ENST00000395303 C4BP0C0L5 1744 aa17.89■□□□□ 0.45
HLA-DMA-202ENST00000395303 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-202ENST00000395303 FCHSD2O94868 740 aa17.88■□□□□ 0.45
HLA-DMA-202ENST00000395303 MAP3K5Q99683 1374 aa17.88■□□□□ 0.45
HLA-DMA-202ENST00000395303 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
HLA-DMA-202ENST00000395303 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
HLA-DMA-202ENST00000395303 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
HLA-DMA-202ENST00000395303 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-202ENST00000395303 UTRNP46939 3433 aa17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 KCNQ4P56696 695 aa17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
HLA-DMA-202ENST00000395303 CABP4P57796 275 aa17.85■□□□□ 0.45
HLA-DMA-202ENST00000395303 ARXQ96QS3 562 aa17.85■□□□□ 0.45
HLA-DMA-202ENST00000395303 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 SIK1P57059 783 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 PHACTR3Q96KR7 559 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 SLC52A2Q9HAB3 445 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 TJP1Q07157 1748 aa17.84■□□□□ 0.45
HLA-DMA-202ENST00000395303 CHD4Q14839 1912 aa17.83■□□□□ 0.44
HLA-DMA-202ENST00000395303 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
HLA-DMA-202ENST00000395303 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
HLA-DMA-202ENST00000395303 ZNF784Q8NCA9 323 aaPredicted RBP17.82■□□□□ 0.44
HLA-DMA-202ENST00000395303 CEMIPQ8WUJ3 1361 aa17.81■□□□□ 0.44
HLA-DMA-202ENST00000395303 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
HLA-DMA-202ENST00000395303 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
HLA-DMA-202ENST00000395303 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
HLA-DMA-202ENST00000395303 ITPK1Q13572 414 aa17.79■□□□□ 0.44
HLA-DMA-202ENST00000395303 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
HLA-DMA-202ENST00000395303 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
HLA-DMA-202ENST00000395303 SLC16A10Q8TF71 515 aa17.79■□□□□ 0.44
HLA-DMA-202ENST00000395303 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
HLA-DMA-202ENST00000395303 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
HLA-DMA-202ENST00000395303 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
HLA-DMA-202ENST00000395303 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
HLA-DMA-202ENST00000395303 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
HLA-DMA-202ENST00000395303 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
HLA-DMA-202ENST00000395303 COL23A1Q86Y22 540 aaPredicted RBP17.75■□□□□ 0.43
HLA-DMA-202ENST00000395303 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
HLA-DMA-202ENST00000395303 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
HLA-DMA-202ENST00000395303 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
HLA-DMA-202ENST00000395303 CNTNAP4Q9C0A0 1308 aa17.74■□□□□ 0.43
HLA-DMA-202ENST00000395303 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
HLA-DMA-202ENST00000395303 AK7Q96M32 723 aa17.74■□□□□ 0.43
HLA-DMA-202ENST00000395303 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
HLA-DMA-202ENST00000395303 SSFA2P28290 1259 aa17.73■□□□□ 0.43
HLA-DMA-202ENST00000395303 POLD1P28340 1107 aa17.73■□□□□ 0.43
HLA-DMA-202ENST00000395303 TEFQ10587 303 aa17.73■□□□□ 0.43
HLA-DMA-202ENST00000395303 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
HLA-DMA-202ENST00000395303 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
HLA-DMA-202ENST00000395303 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
HLA-DMA-202ENST00000395303 NEFMP07197 916 aa17.72■□□□□ 0.43
HLA-DMA-202ENST00000395303 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
HLA-DMA-202ENST00000395303 VSIG10Q8N0Z9 540 aa17.71■□□□□ 0.43
HLA-DMA-202ENST00000395303 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
HLA-DMA-202ENST00000395303 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
HLA-DMA-202ENST00000395303 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
HLA-DMA-202ENST00000395303 GPR162Q16538 588 aa17.69■□□□□ 0.42
HLA-DMA-202ENST00000395303 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
HLA-DMA-202ENST00000395303 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
HLA-DMA-202ENST00000395303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
HLA-DMA-202ENST00000395303 GNPATO15228 680 aa17.68■□□□□ 0.42
HLA-DMA-202ENST00000395303 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
HLA-DMA-202ENST00000395303 ADRA2BP18089 450 aa17.68■□□□□ 0.42
HLA-DMA-202ENST00000395303 MCM10Q7L590 875 aa17.68■□□□□ 0.42
HLA-DMA-202ENST00000395303 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 DNAJC10Q8IXB1 793 aa17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
HLA-DMA-202ENST00000395303 CYP19A1P11511 503 aaPredicted RBP17.66■□□□□ 0.42
HLA-DMA-202ENST00000395303 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
HLA-DMA-202ENST00000395303 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
HLA-DMA-202ENST00000395303 LAMB4A4D0S4 1761 aa17.66■□□□□ 0.42
HLA-DMA-202ENST00000395303 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
HLA-DMA-202ENST00000395303 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
HLA-DMA-202ENST00000395303 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
HLA-DMA-202ENST00000395303 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
HLA-DMA-202ENST00000395303 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
HLA-DMA-202ENST00000395303 MSH5O43196 834 aa17.64■□□□□ 0.41
HLA-DMA-202ENST00000395303 KCNQ3O43525 872 aa17.64■□□□□ 0.41
HLA-DMA-202ENST00000395303 PHF14O94880 888 aa17.64■□□□□ 0.41
HLA-DMA-202ENST00000395303 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.41
HLA-DMA-202ENST00000395303 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
HLA-DMA-202ENST00000395303 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms